RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 NUP155O75694 1391 aa0.68□□□□□ -2.3
MDM2-227ENST00000540709 PIK3C2GO75747 1445 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 ADGRL3Q9HAR2 1447 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 SIPA1L1O43166 1804 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 A0A087X0T9 212 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 TRAV14DV4A0A0A6YYC5 116 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 H7C1C5 153 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 AIPO00170 330 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 MRPS14O60783 128 aaKnown RBP0.67□□□□□ -2.3
MDM2-227ENST00000540709 ZNF737O75373 536 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 TCL1BO95988 128 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 APOA2P02652 100 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 HTR1AP08908 422 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 CRYGAP11844 174 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 SPI1P17947 270 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 GPX2P18283 190 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 ATP5G3P48201 142 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 ZNF80P51504 273 aaPredicted RBP0.67□□□□□ -2.3
MDM2-227ENST00000540709 PIGPP57054 158 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 HSPE1P61604 102 aaKnown RBP0.67□□□□□ -2.3
MDM2-227ENST00000540709 LCN6P62502 163 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 POU6F1Q14863 301 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 BCL2L15Q5TBC7 163 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 FAM173BQ6P4H8 233 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 C7orf65Q6ZTY9 151 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 LCA10Q71F78 164 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 DHFR2Q86XF0 187 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 SMIM20Q8N5G0 67 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 FAM24BQ8N5W8 94 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 SIGLECL1Q8N7X8 197 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 TERB2Q8NHR7 220 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 GPR146Q96CH1 333 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 ZHX1-C8orf76Q96EF9 292 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 TMEM70Q9BUB7 260 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 C6orf62Q9GZU0 229 aaPredicted RBP0.67□□□□□ -2.3
MDM2-227ENST00000540709 CENPHQ9H3R5 247 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 MRPL40Q9NQ50 206 aaKnown RBP0.67□□□□□ -2.3
MDM2-227ENST00000540709 MED11Q9P086 117 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 SS18L2Q9UHA2 77 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 PYCARDQ9ULZ3 195 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 UFC1Q9Y3C8 167 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 DICER1Q9UPY3 1922 aaKnown RBP0.67□□□□□ -2.3
MDM2-227ENST00000540709 ROBO3Q96MS0 1386 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 COL6A6A6NMZ7 2263 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 RALGAPA2Q2PPJ7 1873 aa0.67□□□□□ -2.3
MDM2-227ENST00000540709 NCOA1Q15788 1441 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 TRBV19A0A075B6N1 114 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 TRAV3A0A0B4J244 114 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 DUXBA0A1W2PPF3 345 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 OR51F1A6NGY5 319 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 TMEM212A6NML5 194 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 RIIAD1A6NNX1 92 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 BUB1B-PAK6H3BSN5 160 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 PGRMC1O00264 195 aaKnown RBP0.66□□□□□ -2.3
MDM2-227ENST00000540709 TAX1BP3O14907 124 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 OR2J2O76002 312 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 OR4E1P0C645 316 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 MGST1P10620 155 aaKnown RBP0.66□□□□□ -2.3
MDM2-227ENST00000540709 IDO1P14902 403 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 NFYBP25208 207 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 SRIP30626 198 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 SERPINB1P30740 379 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 GNG3P63215 75 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 ZNF345Q14585 488 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 DEFB115Q30KQ5 88 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 SCGB2B2Q4G0G5 96 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 LINC01554Q52M75 96 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 RNASE10Q5GAN6 216 aaKnown RBP0.66□□□□□ -2.3
MDM2-227ENST00000540709 OR10J5Q8NHC4 309 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 PFN4Q8NHR9 129 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 STAG3L4Q8TBR4 150 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 WFDC5Q8TCV5 224 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 MBD3L1Q8WWY6 194 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 ANP32BQ92688 251 aaKnown RBP0.66□□□□□ -2.3
MDM2-227ENST00000540709 Q96M85 177 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 ZNF714Q96N38 554 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 HIST1H2BLQ99880 126 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 PRRT1Q99946 306 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 SLC50A1Q9BRV3 221 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 YIPF3Q9GZM5 350 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 IMUPQ9GZP8 106 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 PCBD2Q9H0N5 130 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 TRABDQ9H4I3 376 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 PARVBQ9HBI1 364 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 BIN3Q9NQY0 253 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 PCTPQ9UKL6 214 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 PRNDQ9UKY0 176 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 SLC35A3Q9Y2D2 325 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 DOCK5Q9H7D0 1870 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 SDK1Q7Z5N4 2213 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 KIF24Q5T7B8 1368 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 KIF13BQ9NQT8 1826 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 HECW2Q9P2P5 1572 aa0.66□□□□□ -2.3
MDM2-227ENST00000540709 SCN10AQ9Y5Y9 1956 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 IGKV1D-42A0A075B6H8 117 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 TRGV10A0A0A0MS01 117 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 TRAV4A0A0B4J268 109 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 FUOMA2VDF0 154 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 C7orf71A4D174 169 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 IBA57-AS1B1ANH7 110 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms