RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, human

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-229	ENST00000540643	FRMD6-AS1	P0C7T7	363 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	RUNX3	Q13761	415 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	CHCHD5	Q9BSY4	110 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	CACNA1G	O43497	2377 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.79	□□□□□ -0.68
SFI1-229	ENST00000540643		H0YIG0	161 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	B4GALT1	P15291	398 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	IL15RA	Q13261	267 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	TEN1	Q86WV5	123 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	OR9G1	Q8NH87	305 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643		K7ESF4	209 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	CLDN14	O95500	239 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	XG	P55808	180 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	SPATA25	Q9BR10	227 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	ZNF581	Q9P0T4	197 aa		10.79	□□□□□ -0.68
SFI1-229	ENST00000540643	NTF4	P34130	210 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	ADAMTSL4	Q6UY14	1074 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	FOXF1	Q12946	379 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	RRN3P1	Q2M238	152 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	IGLV1-36	A0A0B4J1U3	117 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643		A0A0J9YY10	115 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	WIPF3	A6NGB9	483 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	NPIPB6	E9PJ23	425 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	LINC00694	P0DN24	101 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	HOXA4	Q00056	320 aa	Predicted RBP	10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	FAM214B	Q7L5A3	538 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	TMEM52	Q8NDY8	209 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	ZNF488	Q96MN9	340 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	TRIOBP	Q9H2D6	2365 aa		10.78	□□□□□ -0.68
SFI1-229	ENST00000540643	IGHV3-15	A0A0B4J1V0	119 aa		10.77	□□□□□ -0.68
SFI1-229	ENST00000540643		H3BMM0	161 aa		10.77	□□□□□ -0.68
SFI1-229	ENST00000540643	ETV2	O00321	342 aa	Predicted RBP	10.77	□□□□□ -0.68
SFI1-229	ENST00000540643	PEX7	O00628	323 aa		10.77	□□□□□ -0.68
SFI1-229	ENST00000540643	SEC61G	P60059	68 aa		10.77	□□□□□ -0.68
SFI1-229	ENST00000540643	C8orf46	Q8TAG6	207 aa		10.77	□□□□□ -0.68
SFI1-229	ENST00000540643	UBE2W	Q96B02	151 aa		10.77	□□□□□ -0.68
SFI1-229	ENST00000540643	MED13	Q9UHV7	2174 aa		10.77	□□□□□ -0.68
SFI1-229	ENST00000540643	GGTLC3	B5MD39	225 aa		10.77	□□□□□ -0.69
SFI1-229	ENST00000540643		C9JCJ5	164 aa		10.77	□□□□□ -0.69
SFI1-229	ENST00000540643	ASIP	P42127	132 aa		10.77	□□□□□ -0.69
SFI1-229	ENST00000540643	PHF3	Q92576	2039 aa	Known RBP	10.77	□□□□□ -0.69
SFI1-229	ENST00000540643	CDX4	O14627	284 aa	Predicted RBP	10.77	□□□□□ -0.69
SFI1-229	ENST00000540643	CXCL10	P02778	98 aa		10.77	□□□□□ -0.69
SFI1-229	ENST00000540643	COLCA1	Q6ZS62	124 aa		10.77	□□□□□ -0.69
SFI1-229	ENST00000540643	AMN1	Q8IY45	258 aa		10.77	□□□□□ -0.69
SFI1-229	ENST00000540643	CEND1	Q8N111	149 aa		10.77	□□□□□ -0.69
SFI1-229	ENST00000540643	SLC25A2	Q9BXI2	301 aa		10.77	□□□□□ -0.69
SFI1-229	ENST00000540643	IGKV1D-13	A0A0B4J2D9	117 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	CENPVL3	A0A0U1RRI6	287 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	IGKV1D-33	P01593	117 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	IGKV1-33	P01594	117 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	IGKV1-13	P0DP09	117 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	REG1B	P48304	166 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	LYZ	P61626	148 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	ZFP36L1	Q07352	338 aa	Known RBP	10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	ATP23	Q9Y6H3	246 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	SAA2-SAA4	A0A096LPE2	208 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643		F5H697	171 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	HERVK_113	P63121	156 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	UBALD2	Q8IYN6	164 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	RPRML	Q8N4K4	120 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	DEFB119	Q8N690	84 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	RND1	Q92730	232 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	RNF114	Q9Y508	228 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	TRBV20OR9-2	A0A075B6H5	130 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.76	□□□□□ -0.69	3e-9	■■■□□ 15.5
SFI1-229	ENST00000540643	ASPHD1	Q5U4P2	390 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	MPC1	Q9Y5U8	109 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	EGR4	Q05215	589 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	TTTY13	Q9BZ97	58 aa		10.76	□□□□□ -0.69
SFI1-229	ENST00000540643	PDCD11	Q14690	1871 aa	Known RBP	10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	CEACAM18	A8MTB9	384 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	AREG	P15514	252 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	TMEM240	Q5SV17	173 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	OR13A1	Q8NGR1	328 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	COPS9	Q8WXC6	57 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	GATD1	Q8NB37	220 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	C8orf44	Q96CB5	159 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	TDRD15	B5MCY1	1934 aa	Known RBP	10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	LOC107984640	A0A0U1RRK4	108 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643		Q6AWC8	147 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	GOLT1A	Q6ZVE7	132 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	OR11H6	Q8NGC7	330 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	ZSWIM8	A7E2V4	1837 aa		10.75	□□□□□ -0.69
SFI1-229	ENST00000540643	IGLV3-27	P01718	113 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	COL9A1	P20849	921 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	RNF144B	Q7Z419	303 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	ATP5L2	Q7Z4Y8	100 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	DNAJC30	Q96LL9	226 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	TMEM30CP	A0ZSE6	113 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	HRK	O00198	91 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	IGHV3-48	P01763	117 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	RBP4	P02753	201 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.74	□□□□□ -0.69
SFI1-229	ENST00000540643		V9GYV3	84 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	LAMA3	Q16787	3333 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643		A0A096LPE4	126 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643		A0A1W2PPZ6	126 aa		10.74	□□□□□ -0.69
SFI1-229	ENST00000540643	IFI27	P40305	119 aa	Predicted RBP	10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms