RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 JMJD8Q96S16 334 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 IGLV3-9A0A075B6K5 115 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 LINC00473A8K010 186 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 F2RL2O00254 374 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 HTR1DP28221 377 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 DUTP33316 252 aaKnown RBP12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 PLP1P60201 277 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 PDLIM3Q53GG5 364 aaPredicted RBP12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 TMEM97Q5BJF2 176 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 IBA57Q5T440 356 aaKnown RBP12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 ZNF841Q6ZN19 808 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 ZC2HC1AQ96GY0 325 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 JKAMPQ9P055 326 aa12.4□□□□□ -0.42
GABARAPL1-208ENST00000540424 ERVK-16P61578 105 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 RAB31Q13636 194 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 LTC4SQ16873 150 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 OR2K2Q8NGT1 345 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 ZNF48Q96MX3 618 aaPredicted RBP12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 SSBP4Q9BWG4 385 aaPredicted RBP12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 GGTLC1Q9BX51 225 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 A6NDN8 102 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 SPRY3O43610 288 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 LHBP01229 141 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 GATA4P43694 442 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 C2orf91Q6ZV80 131 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 DCTN5Q9BTE1 182 aa12.39□□□□□ -0.43
GABARAPL1-208ENST00000540424 PSMB11A5LHX3 300 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 FCGR3BO75015 233 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 COX8AP10176 69 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 MSMPQ1L6U9 139 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 FAM57AQ8TBR7 257 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 MGST2Q99735 147 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 CEP250Q9BV73 2442 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 IGHV3OR15-7A0A075B7D8 119 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 C22orf46C9J442 243 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 RPL8P62917 257 aaKnown RBP12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 PRAMEF5Q5TYX0 476 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 MIC13Q5XKP0 118 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 TREML4Q6UXN2 200 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 BPIFA4PQ86YQ2 179 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 OR52E5Q8NH55 327 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 OR4A16Q8NH70 328 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 ITLN1Q8WWA0 313 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 CHCHD1Q96BP2 118 aaKnown RBP12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 URB1-AS1Q96HZ7 61 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 S1PR3Q99500 378 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 RNF7Q9UBF6 113 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 PTPRBP23467 1997 aa12.38□□□□□ -0.43
GABARAPL1-208ENST00000540424 RBMXL3Q8N7X1 1067 aaKnown RBP12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 OR10AG1Q8NH19 301 aa12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 CALYQ9NYX4 217 aa12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 KLK10O43240 276 aa12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 IGLV2-8P01709 118 aa12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 LOXL3P58215 753 aa12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 HSD52Q0P140 79 aa12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 ZNRF1Q8ND25 227 aa12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 GTSF1LQ9H1H1 148 aa12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 SERTAD4Q9NUC0 356 aa12.37□□□□□ -0.43
GABARAPL1-208ENST00000540424 TMEM189A5PLL7 270 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 H3BUT2 72 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 LEPROTL1O95214 131 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 RAB9AP51151 201 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 TNFAIP6P98066 277 aaPredicted RBP12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 SMAGPQ0VAQ4 97 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 TMEM30BQ3MIR4 351 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 GDF5OSQ5U4N7 250 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 VSTM2AQ8TAG5 236 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 FAM222BQ8WU58 562 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 OR5AL1P0C617 328 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 TMPRSS3P57727 454 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 EFNB3Q15768 340 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 OR4A5Q8NH83 315 aa12.36□□□□□ -0.43
GABARAPL1-208ENST00000540424 DMXL1Q9Y485 3027 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 IGHV1-24A0A0C4DH33 117 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 A0A0G2JLM5 398 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 MGST1P10620 155 aaKnown RBP12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 MC5RP33032 325 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 MFAP2P55001 183 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 RPRMLQ8N4K4 120 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 IGF2BP2-AS1Q96M15 143 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 FAM234AQ9H0X4 552 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 IFI27L2Q9H2X8 130 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 SLC25A10Q9UBX3 287 aaPredicted RBP12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 GTF3C1Q12789 2109 aa12.35□□□□□ -0.43
GABARAPL1-208ENST00000540424 OR9G9P0C7N8 305 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 PPOXP50336 477 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 TCTEX1D4Q5JR98 221 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 SPATA31B1PQ5VZV4 182 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 NUP37Q8NFH4 326 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 MBD6Q96DN6 1003 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 ADTRPQ96IZ2 230 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 MAP1LC3CQ9BXW4 147 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 TMEM167BQ9NRX6 74 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 KBTBD11-OT1A0A1B0GTJ5 212 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 APOA2P02652 100 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 CD40P25942 277 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 CKS1BP61024 79 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 SSX8Q7RTT4 187 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms