RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MLANAQ16655 118 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 TIGITQ495A1 244 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 COX19Q49B96 90 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 TMEM200BQ69YZ2 307 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 OR10W1Q8NGF6 305 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 OR9G1Q8NH87 305 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 VSTM2AQ8TAG5 236 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 CMTM2Q8TAZ6 248 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 MS4A10Q96PG2 267 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 PPIAL4EA0A075B759 164 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 PPIAL4DF5H284 164 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 PPIAL4FP0DN26 164 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 CRISP2P16562 243 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 GATA2P23769 480 aaPredicted RBP11.76□□□□□ -0.53
CDCA3-207ENST00000538862 COL8A2P25067 703 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 OR5I1Q13606 314 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 LINC00311Q8N616 119 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 OR4C13Q8NGP0 309 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 PPIAL4AQ9Y536 164 aa11.76□□□□□ -0.53
CDCA3-207ENST00000538862 PSMB11A5LHX3 300 aa11.75□□□□□ -0.53
CDCA3-207ENST00000538862 DPRXA6NFQ7 191 aa11.75□□□□□ -0.53
CDCA3-207ENST00000538862 GGTLC3B5MD39 225 aa11.75□□□□□ -0.53
CDCA3-207ENST00000538862 SCGB1D1O95968 90 aa11.75□□□□□ -0.53
CDCA3-207ENST00000538862 Q0VG73 95 aa11.75□□□□□ -0.53
CDCA3-207ENST00000538862 TMEM186Q96B77 213 aa11.75□□□□□ -0.53
CDCA3-207ENST00000538862 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
CDCA3-207ENST00000538862 CREBBPQ92793 2442 aa11.75□□□□□ -0.53
CDCA3-207ENST00000538862 A0A1B0GUS0 222 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 TMEM178BH3BS89 294 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 FCN1O00602 326 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 ISLRO14498 428 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 TNFRSF13BO14836 293 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-207ENST00000538862 MT-ND6P03923 174 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 CCL3L1P16619 93 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 PPOXP50336 477 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 TPPP2P59282 170 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 RANP62826 216 aaKnown RBP11.74□□□□□ -0.53
CDCA3-207ENST00000538862 SUMO1P63165 101 aaKnown RBP11.74□□□□□ -0.53
CDCA3-207ENST00000538862 CX3CL1P78423 397 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 WDR73Q6P4I2 378 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 WFDC8Q8IUA0 241 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 NAGKQ9UJ70 344 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 TP53TG3Q9ULZ0 132 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 AKAP6Q13023 2319 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 SPG11Q96JI7 2443 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 GRIFINA4D1Z8 144 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 M0QZK8 103 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 DLEU1O43261 78 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 IER3P46695 156 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 SUB1P53999 127 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDCA3-207ENST00000538862 C1orf194Q5T5A4 169 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 OR8I2Q8N0Y5 310 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 FAM167A-AS1Q96KT0 104 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 WFIKKN1Q96NZ8 548 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 SAP30LQ9HAJ7 183 aa11.74□□□□□ -0.53
CDCA3-207ENST00000538862 VSTM5A8MXK1 200 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 NDUFB3O43676 98 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 FCN3O75636 299 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 BSPH1Q075Z2 132 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 USF2Q15853 346 aaPredicted RBP11.73□□□□□ -0.53
CDCA3-207ENST00000538862 LRRC10Q5BKY1 277 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 OR1L4Q8NGR5 311 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 OR10X1Q8NGY0 326 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 OR2T6Q8NHC8 308 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 ST6GALNAC6Q969X2 333 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 IGF2BP2-AS1Q96M15 143 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 SLC25A2Q9BXI2 301 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 TMEM106BQ9NUM4 274 aa11.73□□□□□ -0.53
CDCA3-207ENST00000538862 E7EUB6 86 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 IGLV2-8P01709 118 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 ZNF137PP52743 207 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 KRTAP10-9P60411 292 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 GSX1Q9H4S2 264 aaPredicted RBP11.72□□□□□ -0.53
CDCA3-207ENST00000538862 JKAMPQ9P055 326 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 WASHC3Q9Y3C0 194 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 PDZD2O15018 2839 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 HRNRQ86YZ3 2850 aaPredicted RBP11.72□□□□□ -0.53
CDCA3-207ENST00000538862 ABCA4P78363 2273 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 CGB1A6NKQ9 187 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 IGLV2-23P01705 113 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 THBDP07204 575 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 LINC00310P59036 64 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 WT1-ASQ06250 92 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 THAP8Q8NA92 274 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 ZNF430Q9H8G1 570 aaPredicted RBP11.72□□□□□ -0.53
CDCA3-207ENST00000538862 CDC42EP3Q9UKI2 254 aa11.72□□□□□ -0.53
CDCA3-207ENST00000538862 POLR3KQ9Y2Y1 108 aaPredicted RBP11.72□□□□□ -0.53
CDCA3-207ENST00000538862 SMIM27A0A1W2PRY6 76 aa11.71□□□□□ -0.53
CDCA3-207ENST00000538862 TCRBV4S1A1TA0A5B7 111 aa11.71□□□□□ -0.53
CDCA3-207ENST00000538862 SERF1AO75920 110 aa11.71□□□□□ -0.53
CDCA3-207ENST00000538862 MC5RP33032 325 aa11.71□□□□□ -0.53
CDCA3-207ENST00000538862 REG1BP48304 166 aa11.71□□□□□ -0.53
CDCA3-207ENST00000538862 UBE2L3P68036 154 aaKnown RBP11.71□□□□□ -0.53
CDCA3-207ENST00000538862 C10orf113Q5VZT2 155 aa11.71□□□□□ -0.53
CDCA3-207ENST00000538862 BAGE3Q86Y29 109 aa11.71□□□□□ -0.53
CDCA3-207ENST00000538862 BAGE2Q86Y30 109 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms