RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 RPLP1P05386 114 aaKnown RBP10.99□□□□□ -0.65
CD4-208ENST00000538827 ELANEP08246 267 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 MDKP21741 143 aaPredicted RBP10.99□□□□□ -0.65
CD4-208ENST00000538827 PSMB8P28062 276 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 NPBWR1P48145 328 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 CAMLGP49069 296 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 RAB9AP51151 201 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 RAB31Q13636 194 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 KLK9Q2XQG4 91 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 TIGITQ495A1 244 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 ALKAL2Q6UX46 152 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 CLEC19AQ6UXS0 136 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 TMEM182Q6ZP80 229 aaPredicted RBP10.99□□□□□ -0.65
CD4-208ENST00000538827 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.99□□□□□ -0.65
CD4-208ENST00000538827 THAP8Q8NA92 274 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 OR5AU1Q8NGC0 362 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 OR4X1Q8NH49 305 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 LINC01006Q8NI28 216 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 ZNF502Q8TBZ5 544 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 TMED6Q8WW62 240 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 GNPNAT1Q96EK6 184 aaPredicted RBP10.99□□□□□ -0.65
CD4-208ENST00000538827 GGTLC1Q9BX51 225 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 KCNIP2Q9NS61 270 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 KLK9Q9UKQ9 250 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 A0A0G2JLM5 398 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 OR2T8A6NH00 312 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 CFDP00746 253 aaPredicted RBP10.98□□□□□ -0.65
CD4-208ENST00000538827 C12orf54Q6X4T0 127 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 CYP2G1PQ6ZSU1 146 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 COMMD1Q8N668 190 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 TMEM116Q8NCL8 245 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 OR2G3Q8NGZ4 309 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 USMG5Q96IX5 58 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 CCDC140Q96MF4 163 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 OR5B12Q96R08 314 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 ARV1Q9H2C2 271 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 LSM4Q9Y4Z0 139 aaKnown RBP10.98□□□□□ -0.65
CD4-208ENST00000538827 RNF114Q9Y508 228 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 PXMP4Q9Y6I8 212 aa10.98□□□□□ -0.65
CD4-208ENST00000538827 IGKV1D-37A0A075B6S9 117 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 IGKV1OR2-108A0A075B7D4 117 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 TRBV7-1A0A0A6YYK4 115 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 TCRBV4S1A1TA0A5B7 111 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 ANKRD34BA5PLL1 514 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 BRI3O95415 125 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 FFAR4Q5NUL3 377 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 FAM74A1Q5RGS3 127 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 MIC13Q5XKP0 118 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 EIF5AL1Q6IS14 154 aaKnown RBP10.97□□□□□ -0.65
CD4-208ENST00000538827 C11orf44Q8N8P7 122 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 TIMM9Q9Y5J7 89 aa10.97□□□□□ -0.65
CD4-208ENST00000538827 CLPSL1A2RUU4 121 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 PPP5D1E7EU14 171 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 F8W735 103 aaPredicted RBP10.96□□□□□ -0.65
CD4-208ENST00000538827 IFNA7P01567 189 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 IGLC1P0CG04 106 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 SPP1P10451 314 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 GATA2P23769 480 aaPredicted RBP10.96□□□□□ -0.65
CD4-208ENST00000538827 B2MP61769 119 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 ZNF90Q03938 601 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 AKR1C8PQ5T2L2 129 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 HIST2H2BDQ6DRA6 164 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 BPIFCQ8NFQ6 507 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 TRGV9Q99603 122 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 TXN2Q99757 166 aa10.96□□□□□ -0.65
CD4-208ENST00000538827 PSMG3Q9BT73 122 aaPredicted RBP10.96□□□□□ -0.65
CD4-208ENST00000538827 GAR1Q9NY12 217 aaKnown RBP10.96□□□□□ -0.65
CD4-208ENST00000538827 NOTCH1P46531 2555 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 TRAV30A0A087WSZ9 112 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 NUPL2O15504 423 aaKnown RBP10.95□□□□□ -0.66
CD4-208ENST00000538827 TGOLN2O43493 480 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 TSPAN15O95858 294 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 FABP1P07148 127 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 SEC11BP0C7V7 166 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 LINC00869P0C866 280 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 ARL3P36405 182 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 IFITM2Q01629 132 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 ZNF616Q08AN1 781 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 TEX261Q6UWH6 196 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 STPG3Q8N7X2 389 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 ZNF491Q8N8L2 437 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 PHYHIPLQ96FC7 376 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 DOK5Q9P104 306 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 UBQLN2Q9UHD9 624 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 SLC45A2Q9UMX9 530 aa10.95□□□□□ -0.66
CD4-208ENST00000538827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.94□□□□□ -0.66
CD4-208ENST00000538827 IGHV3-35A0A0C4DH35 117 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 NUDT19A8MXV4 375 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 TRBV12-3P01733 135 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 CLEC3BP05452 202 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 LGALS1P09382 135 aaKnown RBP10.94□□□□□ -0.66
CD4-208ENST00000538827 CD28P10747 220 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 RAB2AP61019 212 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 LYZP61626 148 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 ZNF680Q8NEM1 530 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 CHRDL1Q9BU40 450 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 SLC39A9Q9NUM3 307 aa10.94□□□□□ -0.66
CD4-208ENST00000538827 TOMM40O96008 361 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 IGKV1-17P01599 117 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms