RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 C12orf77C9JDV5 145 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 H3BUT2 72 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 PEX7O00628 323 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 HSPB6O14558 160 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 SPINT2O43291 252 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 CD27P26842 260 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 TCL1AP56279 114 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 FOXL2P58012 376 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 B3GALT5-AS1P59052 145 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 FXYD3Q14802 87 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 C2orf83Q53S99 150 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 GDF5OSQ5U4N7 250 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 ADAMTSL5Q6ZMM2 481 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 C16orf47Q6ZP98 133 aaPredicted RBP5.44□□□□□ -1.54
USP28-207ENST00000538475 SRCAPQ6ZRS2 3230 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 MIR17HGQ75NE6 70 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 OR1L8Q8NGR8 309 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 COQ2Q96H96 371 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 FMC1Q96HJ9 113 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 GPR82Q96P67 336 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 DEFB118Q96PH6 123 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 VGLL1Q99990 258 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 ZNF747Q9BV97 191 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 SRXN1Q9BYN0 137 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 FNDC4Q9H6D8 234 aaPredicted RBP5.44□□□□□ -1.54
USP28-207ENST00000538475 TMEM14BQ9NUH8 114 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 MRPL16Q9NX20 251 aaKnown RBP5.44□□□□□ -1.54
USP28-207ENST00000538475 CLEC5AQ9NY25 188 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 PRNDQ9UKY0 176 aa5.44□□□□□ -1.54
USP28-207ENST00000538475 IGHV3-20A0A0C4DH32 117 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 A0A1W2PR77 199 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 C19orf71A6NCJ1 209 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 SRRM4A7MD48 611 aaKnown RBP5.43□□□□□ -1.54
USP28-207ENST00000538475 LINC01619G3V211 115 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 CHEK1O14757 476 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 GNG7O60262 68 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 SPINK4O60575 86 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 MRPL33O75394 65 aaKnown RBP5.43□□□□□ -1.54
USP28-207ENST00000538475 DEFA4P12838 97 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 CA6P23280 308 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 S100A7P31151 101 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 OTX2P32243 289 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 SSR4P51571 173 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 MZT1Q08AG7 82 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 RIGQ13278 110 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 TMEM177Q53S58 311 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 SPATA31B1PQ5VZV4 182 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 SLC25A48Q6ZT89 311 aaKnown RBP5.43□□□□□ -1.54
USP28-207ENST00000538475 GGNQ86UU5 652 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 FAM90A1Q86YD7 464 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 ZADH2Q8N4Q0 377 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 TTC9CQ8N5M4 171 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 SMRP1Q8NCR6 262 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 PPP1R35Q8TAP8 253 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 FGFBP3Q8TAT2 258 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 GTSF1Q8WW33 167 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 SSMEM1Q8WWF3 244 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 NEU4Q8WWR8 484 aaPredicted RBP5.43□□□□□ -1.54
USP28-207ENST00000538475 ZNF503Q96F45 646 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 S1PR3Q99500 378 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 MLST8Q9BVC4 326 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 SSBP3Q9BWW4 388 aaPredicted RBP5.43□□□□□ -1.54
USP28-207ENST00000538475 ZNF355PQ9NSJ1 428 aa5.43□□□□□ -1.54
USP28-207ENST00000538475 HEATR1Q9H583 2144 aaKnown RBP5.42□□□□□ -1.54
USP28-207ENST00000538475 IGHV3-15A0A0B4J1V0 119 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 C5orf49A4QMS7 147 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 LINC00473A8K010 186 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 H0Y8G0 127 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 FOXH1O75593 365 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 TSPAN13O95857 204 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 IGHV3-7P01780 117 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 MYCNOSP40205 109 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 CYB561P49447 251 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 RAB9AP51151 201 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 SUB1P53999 127 aaKnown RBP eCLIP5.42□□□□□ -1.54
USP28-207ENST00000538475 SLC35B1P78383 322 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 RPL24P83731 157 aaKnown RBP5.42□□□□□ -1.54
USP28-207ENST00000538475 ZXDAP98168 799 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 SRYQ05066 204 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 FOXF2Q12947 444 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 ZNF766Q5HY98 468 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 ZNF329Q86UD4 541 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 ZNF808Q8N4W9 903 aaPredicted RBP5.42□□□□□ -1.54
USP28-207ENST00000538475 KIR3DL3Q8N743 410 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 OR5AN1Q8NGI8 311 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 OR10D3Q8NH80 312 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 ZNF418Q8TF45 676 aaPredicted RBP5.42□□□□□ -1.54
USP28-207ENST00000538475 ST6GALNAC6Q969X2 333 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 FAM167A-AS1Q96KT0 104 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 IMMP1LQ96LU5 166 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 CLUHP3Q96NS8 147 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 PHF7Q9BWX1 381 aaPredicted RBP5.42□□□□□ -1.54
USP28-207ENST00000538475 TM2D2Q9BX73 214 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 PROK2Q9HC23 129 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 CYSLTR1Q9Y271 337 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 TNCP24821 2201 aa5.42□□□□□ -1.54
USP28-207ENST00000538475 DOCK10Q96BY6 2186 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 TEX48A0A1B0GUV7 120 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 FBLL1A6NHQ2 334 aaKnown RBP5.41□□□□□ -1.54
USP28-207ENST00000538475 IQCF6A8MYZ5 107 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms