RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ONECUT1Q9UBC0 465 aa8.74□□□□□ -1.01
RTN3-208ENST00000537981 KLF13Q9Y2Y9 288 aaPredicted RBP8.74□□□□□ -1.01
RTN3-208ENST00000537981 H3BMG7 143 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 SP9P0CG40 484 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 LINC01545Q5VT33 79 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 FOXI2Q6ZQN5 318 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 MAP1LC3CQ9BXW4 147 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 KBTBD11-OT1A0A1B0GTJ5 212 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 TNFRSF13BO14836 293 aaPredicted RBP8.73□□□□□ -1.01
RTN3-208ENST00000537981 KALRNO60229 2985 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 OR2J3O76001 311 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 CNIH1O95406 144 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 IGHV3-7P01780 117 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 ZNF766Q5HY98 468 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 TIMM23BQ5SRD1 257 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 C10orf128Q5T292 105 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 DGAT2L7PQ6IED9 249 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 WIPF2Q8TF74 440 aaPredicted RBP8.73□□□□□ -1.01
RTN3-208ENST00000537981 TXNDC17Q9BRA2 123 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 SCNM1Q9BWG6 230 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 MS4A6AQ9H2W1 248 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 IDI2-AS1Q9NZ38 188 aa8.73□□□□□ -1.01
RTN3-208ENST00000537981 A0A1W2PQM1 296 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 LINC00473A8K010 186 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 MORN5Q5VZ52 161 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 Q71RC1 249 aaPredicted RBP8.72□□□□□ -1.01
RTN3-208ENST00000537981 DLL3Q9NYJ7 618 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 CSMD1Q96PZ7 3565 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 TRAV3A0A0B4J244 114 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 B5MCH6 92 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 PRSS46E5RG02 174 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 FNDC10F2Z333 226 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 TFF1P04155 84 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 FAM87AP0C7U9 286 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 MALP21145 153 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 RTL8BQ17RB0 113 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 COX19Q49B96 90 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 OR10D3Q8NH80 312 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 TMEM54Q969K7 222 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 AKIRIN1Q9H9L7 192 aaPredicted RBP8.72□□□□□ -1.01
RTN3-208ENST00000537981 DUSP13Q9UII6 198 aa8.72□□□□□ -1.01
RTN3-208ENST00000537981 PRB4P10163 310 aaPredicted RBP8.71□□□□□ -1.02
RTN3-208ENST00000537981 CFHR2P36980 270 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 LOXL1Q08397 574 aaPredicted RBP8.71□□□□□ -1.02
RTN3-208ENST00000537981 LINC00322Q6ZN03 302 aaPredicted RBP8.71□□□□□ -1.02
RTN3-208ENST00000537981 C1orf210Q8IVY1 113 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 VGLL1Q99990 258 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 KCNIP1Q9NZI2 227 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 A0A1B0GXF2 115 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 WIPF1O43516 503 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 CER1O95813 267 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 VDAC2P45880 294 aaPredicted RBP8.71□□□□□ -1.02
RTN3-208ENST00000537981 C3AR1Q16581 482 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 TEPPQ6URK8 271 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 MRPL16Q9NX20 251 aaKnown RBP8.71□□□□□ -1.02
RTN3-208ENST00000537981 JPT1Q9UK76 154 aa8.71□□□□□ -1.02
RTN3-208ENST00000537981 MGAQ8IWI9 3026 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 TRAV5A0A0B4J249 113 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 TRBV7-9A0A0J9YWB2 115 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 IGHV3-9P01782 118 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 FAM27BQ5VT28 67 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 H2BFWTQ7Z2G1 175 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 PPP1R32Q7Z5V6 425 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 FAM234AQ9H0X4 552 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 C19orf67A6NJJ6 358 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 PRR33A8MZF0 331 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 C2CD4DB7Z1M9 353 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 MGST3O14880 152 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 SPINK8P0C7L1 97 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 MYOD1P15172 320 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 GCSHP23434 173 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 TMEM196Q5HYL7 178 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 LCNL1Q6ZST4 164 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 BOD1L2Q8IYS8 172 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 OR8A1Q8NGG7 326 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 OSR1Q8TAX0 266 aaPredicted RBP8.7□□□□□ -1.02
RTN3-208ENST00000537981 HSD17B10Q99714 261 aaKnown RBP8.7□□□□□ -1.02
RTN3-208ENST00000537981 YAE1D1Q9NRH1 226 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 TRAPPC2LQ9UL33 140 aa8.7□□□□□ -1.02
RTN3-208ENST00000537981 A1L4Q6 167 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 LINC01548A6NM66 108 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 SIVA1O15304 175 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 LTAP01374 205 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 NMUP48645 174 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 XGP55808 180 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 PARM1Q6UWI2 310 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 C8orf86Q6ZUL3 223 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 SMIM20Q8N5G0 67 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 Q8TCH9 128 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 GTSF1Q8WW33 167 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 PGLYRP4Q96LB8 373 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 PLA2G2FQ9BZM2 168 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 HSPB8Q9UJY1 196 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 ZDBF2Q9HCK1 2354 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 IGHV3-43A0A0B4J1X8 118 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 DEFB108AA8MXU0 73 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 IGHV3-43DP0DP04 118 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 ATP5J2P56134 94 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 GNG5P63218 68 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 C9orf135Q5VTT2 229 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms