RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 GINS3Q9BRX5 216 aa12.94□□□□□ -0.34
GPN3-202ENST00000537466 NUDT15Q9NV35 164 aa12.94□□□□□ -0.34
GPN3-202ENST00000537466 TENM3Q9P273 2699 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 SYNGR2O43760 224 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 MED6O75586 246 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 IFNA4P05014 189 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 OR10J1P30954 320 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 LAMTOR1Q6IAA8 161 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 LINC00322Q6ZN03 302 aaPredicted RBP12.93□□□□□ -0.34
GPN3-202ENST00000537466 MITD1Q8WV92 249 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 ST8SIA2Q92186 375 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 ACY3Q96HD9 319 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 TM2D3Q9BRN9 247 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 SRD5A3Q9H8P0 318 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 BATF3Q9NR55 127 aa12.93□□□□□ -0.34
GPN3-202ENST00000537466 IGHV3-66A0A0C4DH42 116 aa12.92□□□□□ -0.34
GPN3-202ENST00000537466 RBMY1BA6NDE4 496 aaKnown RBP12.92□□□□□ -0.34
GPN3-202ENST00000537466 RBMY1EA6NEQ0 496 aaKnown RBP12.92□□□□□ -0.34
GPN3-202ENST00000537466 WRBO00258 174 aa12.92□□□□□ -0.34
GPN3-202ENST00000537466 SCGB2A1O75556 95 aa12.92□□□□□ -0.34
GPN3-202ENST00000537466 RBMY1DP0C7P1 496 aaKnown RBP12.92□□□□□ -0.34
GPN3-202ENST00000537466 ATP5IP56385 69 aaPredicted RBP12.92□□□□□ -0.34
GPN3-202ENST00000537466 ZNF846Q147U1 533 aa12.92□□□□□ -0.34
GPN3-202ENST00000537466 HAGHQ16775 308 aa12.92□□□□□ -0.34
GPN3-202ENST00000537466 LILRB2Q8N423 598 aa12.92□□□□□ -0.34
GPN3-202ENST00000537466 OR4D5Q8NGN0 318 aa12.92□□□□□ -0.34
GPN3-202ENST00000537466 OR1S2Q8NGQ3 325 aa12.92□□□□□ -0.34
GPN3-202ENST00000537466 WDR12Q9GZL7 423 aaKnown RBP12.92□□□□□ -0.34
GPN3-202ENST00000537466 IFNA21P01568 189 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 IFITM3Q01628 133 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 ID3Q02535 119 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 ASAH1Q13510 395 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 FAM90A2PQ658T7 463 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 SEC22CQ9BRL7 303 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 VSIRQ9H7M9 311 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 PAIP2BQ9ULR5 123 aaKnown RBP12.91□□□□□ -0.34
GPN3-202ENST00000537466 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 FAM240BA0A1B0GVZ2 78 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 UPK1BO75841 260 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 YPEL3P61236 119 aaPredicted RBP12.91□□□□□ -0.34
GPN3-202ENST00000537466 POLR2GP62487 172 aaKnown RBP eCLIP12.91□□□□□ -0.34
GPN3-202ENST00000537466 GAMTQ14353 236 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 CIB3Q96Q77 187 aaPredicted RBP12.91□□□□□ -0.34
GPN3-202ENST00000537466 CITED4Q96RK1 184 aa12.91□□□□□ -0.34
GPN3-202ENST00000537466 H3BP45 60 aa12.9□□□□□ -0.34
GPN3-202ENST00000537466 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
GPN3-202ENST00000537466 NPPCP23582 126 aa12.9□□□□□ -0.34
GPN3-202ENST00000537466 GPX4P36969 197 aaPredicted RBP12.9□□□□□ -0.34
GPN3-202ENST00000537466 NKX2-1P43699 371 aaPredicted RBP12.9□□□□□ -0.34
GPN3-202ENST00000537466 RAB11AP62491 216 aa12.9□□□□□ -0.34
GPN3-202ENST00000537466 ODF3L2Q3SX64 289 aa12.9□□□□□ -0.34
GPN3-202ENST00000537466 MZT2BQ6NZ67 158 aa12.9□□□□□ -0.34
GPN3-202ENST00000537466 TCF24Q7RTU0 167 aa12.9□□□□□ -0.34
GPN3-202ENST00000537466 WWC2-AS2Q96NR7 200 aa12.9□□□□□ -0.34
GPN3-202ENST00000537466 ZMAT4Q9H898 229 aa12.9□□□□□ -0.34
GPN3-202ENST00000537466 PRSS46E5RG02 174 aa12.89□□□□□ -0.35
GPN3-202ENST00000537466 CCSO14618 274 aa12.89□□□□□ -0.35
GPN3-202ENST00000537466 DFFBO76075 338 aa12.89□□□□□ -0.35
GPN3-202ENST00000537466 CRYBB3P26998 211 aa12.89□□□□□ -0.35
GPN3-202ENST00000537466 TFPI2P48307 235 aa12.89□□□□□ -0.35
GPN3-202ENST00000537466 IAH1Q2TAA2 248 aaPredicted RBP12.89□□□□□ -0.35
GPN3-202ENST00000537466 SPANXN5Q5MJ07 72 aa12.89□□□□□ -0.35
GPN3-202ENST00000537466 GBGT1Q8N5D6 347 aa12.89□□□□□ -0.35
GPN3-202ENST00000537466 Q8WTZ3 238 aa12.89□□□□□ -0.35
GPN3-202ENST00000537466 METTL26Q96S19 204 aa12.89□□□□□ -0.35
GPN3-202ENST00000537466 STAB2Q8WWQ8 2551 aa12.88□□□□□ -0.35
GPN3-202ENST00000537466 IGKV1D-37A0A075B6S9 117 aa12.88□□□□□ -0.35
GPN3-202ENST00000537466 OR4C46A6NHA9 309 aa12.88□□□□□ -0.35
GPN3-202ENST00000537466 TOMM40O96008 361 aa12.88□□□□□ -0.35
GPN3-202ENST00000537466 USF2Q15853 346 aaPredicted RBP12.88□□□□□ -0.35
GPN3-202ENST00000537466 ZBTB8BQ8NAP8 495 aaPredicted RBP12.88□□□□□ -0.35
GPN3-202ENST00000537466 ZNF431Q8TF32 576 aaPredicted RBP12.88□□□□□ -0.35
GPN3-202ENST00000537466 SLC35E1Q96K37 410 aa12.88□□□□□ -0.35
GPN3-202ENST00000537466 SSSCA1O60232 199 aa12.87□□□□□ -0.35
GPN3-202ENST00000537466 SCGB1D2O95969 90 aa12.87□□□□□ -0.35
GPN3-202ENST00000537466 IL4P05112 153 aa12.87□□□□□ -0.35
GPN3-202ENST00000537466 PSG1P11464 419 aa12.87□□□□□ -0.35
GPN3-202ENST00000537466 BMI1P35226 326 aa12.87□□□□□ -0.35
GPN3-202ENST00000537466 RPP30P78346 268 aaKnown RBP12.87□□□□□ -0.35
GPN3-202ENST00000537466 NBEAL2Q6ZNJ1 2754 aa12.87□□□□□ -0.35
GPN3-202ENST00000537466 ZFP92A6NM28 416 aa12.86□□□□□ -0.35
GPN3-202ENST00000537466 RD3LP0DJH9 198 aa12.86□□□□□ -0.35
GPN3-202ENST00000537466 PAX9P55771 341 aa12.86□□□□□ -0.35
GPN3-202ENST00000537466 ZNF90Q03938 601 aa12.86□□□□□ -0.35
GPN3-202ENST00000537466 SPATA25Q9BR10 227 aa12.86□□□□□ -0.35
GPN3-202ENST00000537466 RETNQ9HD89 108 aa12.86□□□□□ -0.35
GPN3-202ENST00000537466 PSENENQ9NZ42 101 aa12.86□□□□□ -0.35
GPN3-202ENST00000537466 GSKIPQ9P0R6 139 aa12.86□□□□□ -0.35
GPN3-202ENST00000537466 STRAPQ9Y3F4 350 aaKnown RBP12.86□□□□□ -0.35
GPN3-202ENST00000537466 U3KQE9 123 aa12.86□□□□□ -0.35
GPN3-202ENST00000537466 IGKV1OR2-108A0A075B7D4 117 aa12.85□□□□□ -0.35
GPN3-202ENST00000537466 A0A1W2PS18 150 aa12.85□□□□□ -0.35
GPN3-202ENST00000537466 HNRNPCP07910 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
GPN3-202ENST00000537466 P2RY1P47900 373 aa12.85□□□□□ -0.35
GPN3-202ENST00000537466 WFDC3Q8IUB2 231 aa12.85□□□□□ -0.35
GPN3-202ENST00000537466 C12orf45Q8N5I9 185 aaPredicted RBP12.85□□□□□ -0.35
GPN3-202ENST00000537466 ENKURQ8TC29 256 aa12.85□□□□□ -0.35
GPN3-202ENST00000537466 MS4A6AQ9H2W1 248 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms