RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 MIEN1Q9BRT3 115 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 SLC25A33Q9BSK2 321 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 TMEM208Q9BTX3 173 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 NDUFA4L2Q9NRX3 87 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 PEF1Q9UBV8 284 aaKnown RBP4.63□□□□□ -1.67
VPS33A-203ENST00000536212 FAM215AQ9Y5M1 114 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 LINC00312Q9Y6C7 94 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 DNAH14Q0VDD8 3507 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 hADV38S2A0JD32 116 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 IZUMO1RA6ND01 250 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 GAGE10A6NGK3 116 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 CGB1A6NKQ9 187 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF705FA8MVS1 300 aaPredicted RBP4.62□□□□□ -1.67
VPS33A-203ENST00000536212 SNURFLB1AK76 121 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 H0YJW9 148 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 TNFRSF13BO14836 293 aaPredicted RBP4.62□□□□□ -1.67
VPS33A-203ENST00000536212 HOXA3O43365 443 aaPredicted RBP4.62□□□□□ -1.67
VPS33A-203ENST00000536212 HLA-DQA1P01909 254 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 GPX1P07203 203 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 NBEAP1P0C6P0 100 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 FRMD6-AS1P0C7T7 363 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF705DP0CH99 300 aaPredicted RBP4.62□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF705BP0CI00 300 aaPredicted RBP4.62□□□□□ -1.67
VPS33A-203ENST00000536212 SAA1P0DJI8 122 aaPredicted RBP4.62□□□□□ -1.67
VPS33A-203ENST00000536212 COL8A2P25067 703 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 CEACAM8P31997 349 aaPredicted RBP4.62□□□□□ -1.67
VPS33A-203ENST00000536212 BRS3P32247 399 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 IER3P46695 156 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 MEF2CQ06413 473 aaPredicted RBP4.62□□□□□ -1.67
VPS33A-203ENST00000536212 SLAQ13239 276 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 OR5I1Q13606 314 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 FHL3Q13643 280 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 KIAA2026Q5HYC2 2103 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 CYB5R2Q6BCY4 276 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 DUX4L9Q6RFH8 374 aaPredicted RBP4.62□□□□□ -1.67
VPS33A-203ENST00000536212 Q6ZS92 163 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 LHFPL4Q7Z7J7 247 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 MOB3BQ86TA1 216 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 OR8I2Q8N0Y5 310 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 ZADH2Q8N4Q0 377 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 LINC00311Q8N616 119 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 THAP8Q8NA92 274 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 OR9G1Q8NH87 305 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 TMEM167AQ8TBQ9 72 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 CCL13Q99616 98 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 HSPB9Q9BQS6 159 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 SLC25A2Q9BXI2 301 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 COMMD5Q9GZQ3 224 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 GNB4Q9HAV0 340 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 CBLN4Q9NTU7 201 aa4.62□□□□□ -1.67
VPS33A-203ENST00000536212 TECTAO75443 2155 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 MED13Q9UHV7 2174 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 IGKV1D-37A0A075B6S9 117 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 NKX6-3A6NJ46 265 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 F2Z2F3 143 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 BMPR1BO00238 502 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 OR7C2O60412 319 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 FSTL3O95633 263 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 APOA2P02652 100 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 IGKV1-16P04430 117 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 USF1P22415 310 aaPredicted RBP4.61□□□□□ -1.67
VPS33A-203ENST00000536212 MYCNOSP40205 109 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 CTRLP40313 264 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF137PP52743 207 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 ERHP84090 104 aaKnown RBP4.61□□□□□ -1.67
VPS33A-203ENST00000536212 PAX2Q02962 417 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 KLF5Q13887 457 aaPredicted RBP4.61□□□□□ -1.67
VPS33A-203ENST00000536212 DEFB109BQ30KR1 87 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 TOMM20LQ6UXN7 152 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 BAGE3Q86Y29 109 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 BAGE2Q86Y30 109 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 PDPNQ86YL7 162 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 DOLPP1Q86YN1 238 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 FAM216BQ8N7L0 139 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 OR4B1Q8NGF8 309 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 OR1L4Q8NGR5 311 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 GRAMD2BQ96HH9 432 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 CHRDL1Q9BU40 450 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 HINT2Q9BX68 163 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 MRPL20Q9BYC9 149 aaKnown RBP4.61□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF430Q9H8G1 570 aaPredicted RBP4.61□□□□□ -1.67
VPS33A-203ENST00000536212 DNAJC4Q9NNZ3 241 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF586Q9NXT0 402 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 MRPL27Q9P0M9 148 aaKnown RBP4.61□□□□□ -1.67
VPS33A-203ENST00000536212 NAT8BQ9UHF3 227 aa4.61□□□□□ -1.67
VPS33A-203ENST00000536212 UNC80Q8N2C7 3258 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 A0A1W2PS18 150 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 TCRBV4S1A1TA0A5B7 111 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 C20orf202A1L168 122 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 TEX22C9J3V5 150 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF253O75346 499 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 FCN3O75636 299 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 OR2J3O76001 311 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 IGLV2-23P01705 113 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 IRF2P14316 349 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 GATA2P23769 480 aaPredicted RBP4.6□□□□□ -1.67
VPS33A-203ENST00000536212 CDKN1AP38936 164 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 RPL8P62917 257 aaKnown RBP4.6□□□□□ -1.67
VPS33A-203ENST00000536212 TCF15Q12870 199 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 TMEM183BQ1AE95 376 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms