RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 DEFB1P60022 68 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 MLANAQ16655 118 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 TIGITQ495A1 244 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 TTC32Q5I0X7 151 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 PRSS48Q7RTY5 328 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 H2BFWTQ7Z2G1 175 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 CMTM1Q8IZ96 169 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 Q9H3A6 140 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 SAV1Q9H4B6 383 aaPredicted RBP5.43□□□□□ -1.54
NXF1-215ENST00000533440 RHBDL2Q9NX52 303 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 TPRKBQ9Y3C4 175 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 GOLT1BQ9Y3E0 138 aa5.43□□□□□ -1.54
NXF1-215ENST00000533440 TRAV30A0A087WSZ9 112 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 A0A0A6YYH2 397 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 A0A1W2PPQ1 181 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 A6NJ64 397 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 LYRM9A8MSI8 78 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 GPR31O00270 319 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 BUB3O43684 328 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 SCGB2A1O75556 95 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 FCER2P06734 321 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 CBX5P45973 191 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 ZNF79Q15937 498 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 SPINK9Q5DT21 86 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 C22orf42Q6IC83 251 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 SIGLEC15Q6ZMC9 328 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 FOXI2Q6ZQN5 318 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 SSX7Q7RTT5 188 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 ZNF2Q9BSG1 426 aaPredicted RBP5.42□□□□□ -1.54
NXF1-215ENST00000533440 FXYD6Q9H0Q3 95 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 SLC35B3Q9H1N7 401 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 AUNIPQ9H7T9 357 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 NDUFB11Q9NX14 153 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 EHFQ9NZC4 300 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 LRP1Q07954 4544 aaKnown RBP5.42□□□□□ -1.54
NXF1-215ENST00000533440 FAT3Q8TDW7 4589 aa5.42□□□□□ -1.54
NXF1-215ENST00000533440 TMEM238LA0A1B0GVL6 79 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 F5H768 121 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 IGLC1P0CG04 106 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 OPRK1P41145 380 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 RFX2P48378 723 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 SUB1P53999 127 aaKnown RBP eCLIP5.41□□□□□ -1.54
NXF1-215ENST00000533440 PAX9P55771 341 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 YPEL3P61236 119 aaPredicted RBP5.41□□□□□ -1.54
NXF1-215ENST00000533440 PSG9Q00887 426 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 TBCEQ15813 527 aaPredicted RBP5.41□□□□□ -1.54
NXF1-215ENST00000533440 USF2Q15853 346 aaPredicted RBP5.41□□□□□ -1.54
NXF1-215ENST00000533440 BSXQ3C1V8 233 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 SPATA31B1PQ5VZV4 182 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 SFXN4Q6P4A7 337 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 OR4B1Q8NGF8 309 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 OR1S2Q8NGQ3 325 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 Q8WTZ3 238 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 RNF141Q8WVD5 230 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 MRGPRFQ96AM1 343 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 SLC25A38Q96DW6 304 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 C7orf50Q9BRJ6 194 aaKnown RBP5.41□□□□□ -1.54
NXF1-215ENST00000533440 UPK3BQ9BT76 320 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 SCPEP1Q9HB40 452 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 ANAPC10Q9UM13 185 aa5.41□□□□□ -1.54
NXF1-215ENST00000533440 A0A0B4J293 547 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 MEIS3P1A6NDR6 274 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 A8MTW9 85 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 SOCS3O14543 225 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 GSTZ1O43708 216 aaPredicted RBP5.4□□□□□ -1.54
NXF1-215ENST00000533440 P0C879 139 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 RORCP51449 518 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 SCAND1P57086 179 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 DLK1P80370 383 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 DHODHQ02127 395 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 CLINT1Q14677 625 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 IZUMO4Q1ZYL8 232 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 PHLDA2Q53GA4 152 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 CDPF1Q6NVV7 123 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 Q6ZRN7 208 aaPredicted RBP5.4□□□□□ -1.54
NXF1-215ENST00000533440 TBC1D26Q86UD7 250 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 SLC35G3Q8N808 338 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 OR5H6Q8NGV6 325 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 WDR12Q9GZL7 423 aaKnown RBP5.4□□□□□ -1.54
NXF1-215ENST00000533440 MAGT1Q9H0U3 335 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 PTTG2Q9NZH5 202 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 MDFICQ9P1T7 246 aa5.4□□□□□ -1.54
NXF1-215ENST00000533440 RRP15Q9Y3B9 282 aaKnown RBP5.4□□□□□ -1.54
NXF1-215ENST00000533440 A0A0J9YX75 114 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 PLAC8L1A1L4L8 177 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 CBY3A6NI87 242 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 IGKV1-5P01602 117 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 PMP2P02689 132 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 SMR3BP02814 79 aaPredicted RBP5.39□□□□□ -1.55
NXF1-215ENST00000533440 PRM2P04554 102 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 IL4P05112 153 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 ATP5G1P05496 136 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 DEFB130BP0DP73 79 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 DEFB130AP0DP74 79 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 NAT1P18440 290 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 TSPOP30536 169 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 OR10J1P30954 320 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 FUSP35637 526 aaKnown RBP eCLIP5.39□□□□□ -1.55
NXF1-215ENST00000533440 ATP5G3P48201 142 aa5.39□□□□□ -1.55
NXF1-215ENST00000533440 HSPA13P48723 471 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms