RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 C11orf40Q8WZ69 217 aa4.53□□□□□ -1.68
ATM-216ENST00000531525 APOBEC3DQ96AK3 386 aaPredicted RBP4.53□□□□□ -1.68
ATM-216ENST00000531525 ZNF649Q9BS31 505 aa4.53□□□□□ -1.68
ATM-216ENST00000531525 SCRT2Q9NQ03 307 aa4.53□□□□□ -1.68
ATM-216ENST00000531525 FAIMQ9NVQ4 179 aa4.53□□□□□ -1.68
ATM-216ENST00000531525 MED29Q9NX70 200 aa4.53□□□□□ -1.68
ATM-216ENST00000531525 VWFP04275 2813 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 TRAV8-1A0A0A6YYK1 113 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 MAP1LC3B2A6NCE7 125 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 B4DEV8 164 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 ZNF207O43670 478 aaKnown RBP4.52□□□□□ -1.69
ATM-216ENST00000531525 OR10J4P0C629 311 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 GZMHP20718 246 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 CCL1P22362 96 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 RAP1AP62834 184 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 TMEM241Q24JQ0 296 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 LYPD2Q6UXB3 125 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 PDPNQ86YL7 162 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 C20orf196Q8IYI0 205 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 ZNF561Q8N587 486 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 ANKRD29Q8N6D5 301 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 ZNF525Q8N782 197 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 C20orf203Q8NBC4 194 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 OR2M3Q8NG83 312 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 RNASE11Q8TAA1 199 aaKnown RBP4.52□□□□□ -1.69
ATM-216ENST00000531525 HDHD3Q9BSH5 251 aaPredicted RBP4.52□□□□□ -1.69
ATM-216ENST00000531525 MAP1LC3BQ9GZQ8 125 aa4.52□□□□□ -1.69
ATM-216ENST00000531525 ZNF331Q9NQX6 463 aaPredicted RBP4.52□□□□□ -1.69
ATM-216ENST00000531525 INS-IGF2F8WCM5 200 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 S100A7P31151 101 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 GLRXP35754 106 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 CXCL5P42830 114 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 NMUP48645 174 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 PSMB3P49720 205 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 HERVK_113P63121 156 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 GNG5P63218 68 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 IL15RAQ13261 267 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 IAH1Q2TAA2 248 aaPredicted RBP4.51□□□□□ -1.69
ATM-216ENST00000531525 TMEM128Q5BJH2 165 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 AKR1C8PQ5T2L2 129 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 SLC48A1Q6P1K1 146 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 GOLT1AQ6ZVE7 132 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 MARCH3Q86UD3 253 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 CLVS1Q8IUQ0 354 aaPredicted RBP4.51□□□□□ -1.69
ATM-216ENST00000531525 IFT20Q8IY31 132 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 FAM24BQ8N5W8 94 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.51□□□□□ -1.69
ATM-216ENST00000531525 LY6G5BQ8NDX9 201 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 OR10G4Q8NGN3 311 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 C10orf105Q8TEF2 133 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 TMEM101Q96IK0 257 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 PFDN5Q99471 154 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 OPRPNQ99935 248 aaPredicted RBP4.51□□□□□ -1.69
ATM-216ENST00000531525 TMEM147Q9BVK8 224 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 KRTAP1-5Q9BYS1 174 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 NOX3Q9HBY0 568 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 WFDC1Q9HC57 220 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 OR52A1Q9UKL2 312 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 MCTS1Q9ULC4 181 aaKnown RBP4.51□□□□□ -1.69
ATM-216ENST00000531525 NOTCH1P46531 2555 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 IGSF23A1L1A6 192 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 PRORSD1PA6NEY8 169 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 DPRXA6NFQ7 191 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 KNCNA6PVL3 124 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 F5H5P2 479 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 KPNA4O00629 521 aaPredicted RBP4.51□□□□□ -1.69
ATM-216ENST00000531525 S100A1P23297 94 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 DEFA3P59666 94 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 CAV1Q03135 178 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 ZNF429Q86V71 674 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 KLHL30-AS1Q8NEE0 82 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 OR8B12Q8NGG6 310 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 OR2T27Q8NH04 317 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 ZNF675Q8TD23 568 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 GNPDA2Q8TDQ7 276 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 SERPINI1Q99574 410 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 PAXXQ9BUH6 204 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 RSPO3Q9BXY4 272 aaPredicted RBP4.51□□□□□ -1.69
ATM-216ENST00000531525 FGF23Q9GZV9 251 aaPredicted RBP4.51□□□□□ -1.69
ATM-216ENST00000531525 CDC42EP4Q9H3Q1 356 aaKnown RBP4.51□□□□□ -1.69
ATM-216ENST00000531525 CA10Q9NS85 328 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 CBLN4Q9NTU7 201 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 MED11Q9P086 117 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 ZNF580Q9UK33 172 aa4.51□□□□□ -1.69
ATM-216ENST00000531525 TMED7-TICAM2A0A0A6YYA0 188 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 TRAV26-2A0A0B4J265 109 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 CRYZL1O95825 349 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 CRISP2P16562 243 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 GATA2P23769 480 aaPredicted RBP4.5□□□□□ -1.69
ATM-216ENST00000531525 PHBP35232 272 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 SRP9P49458 86 aaKnown RBP4.5□□□□□ -1.69
ATM-216ENST00000531525 SNRPD2P62316 118 aaKnown RBP4.5□□□□□ -1.69
ATM-216ENST00000531525 COMMD6Q7Z4G1 85 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 YIPF7Q8N8F6 280 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 OR8S1Q8NH09 359 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 SGMS2Q8NHU3 365 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 STAG3L4Q8TBR4 150 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 SOSTQ9BQB4 213 aa4.5□□□□□ -1.69
ATM-216ENST00000531525 C1orf50Q9BV19 199 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms