RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RNASE2P10153 161 aaKnown RBP6.56□□□□□ -1.36
NEDD8-206ENST00000531430 PI3P19957 117 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 SCAND1P57086 179 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 TRIM16LQ309B1 348 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 GDF5OSQ5U4N7 250 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 IZUMO2Q6UXV1 221 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 SPARTQ8N0X7 666 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 TMEM208Q9BTX3 173 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 NRN1Q9NPD7 142 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 GOLT1BQ9Y3E0 138 aa6.56□□□□□ -1.36
NEDD8-206ENST00000531430 YTHDF2Q9Y5A9 579 aaKnown RBP6.56□□□□□ -1.36
NEDD8-206ENST00000531430 LOC102723971A0A1B0GUV8 181 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 IGKV1-17P01599 117 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 IGKV1-5P01602 117 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 OR10J1P30954 320 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 RND2P52198 227 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 SP6Q3SY56 376 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 SIGLEC15Q6ZMC9 328 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 ZNF705AQ6ZN79 300 aaPredicted RBP6.55□□□□□ -1.36
NEDD8-206ENST00000531430 SPATA12Q7Z6I5 190 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 Q8N1X5 172 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 C6orf223Q8N319 242 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 SAMD12Q8N8I0 201 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 GLMPQ8WWB7 406 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 RRNAD1Q96FB5 475 aaKnown RBP6.55□□□□□ -1.36
NEDD8-206ENST00000531430 NEU1Q99519 415 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 PBDC1Q9BVG4 233 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 MAGT1Q9H0U3 335 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 SLC35B3Q9H1N7 401 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 VCX3BQ9H321 246 aa6.55□□□□□ -1.36
NEDD8-206ENST00000531430 HEYLQ9NQ87 328 aaPredicted RBP6.55□□□□□ -1.36
NEDD8-206ENST00000531430 NBDYA0A0U1RRE5 68 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 TEX48A0A1B0GUV7 120 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 ZNF705FA8MVS1 300 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-206ENST00000531430 M0QYG6 137 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 ATG12O94817 140 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 ZNF705DP0CH99 300 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-206ENST00000531430 ZNF705BP0CI00 300 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-206ENST00000531430 RD3LP0DJH9 198 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 HLA-DRB4P13762 266 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 ID1P41134 155 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 RPL5P46777 297 aaKnown RBP6.54□□□□□ -1.36
NEDD8-206ENST00000531430 DLK1P80370 383 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 USF2Q15853 346 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-206ENST00000531430 RRN3P1Q2M238 152 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 RNASE12Q5GAN4 147 aaKnown RBP6.54□□□□□ -1.36
NEDD8-206ENST00000531430 UBE2NLQ5JXB2 153 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 SNX29P2Q8IUI4 249 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 OR1S2Q8NGQ3 325 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 COQ8AQ8NI60 647 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 FCGR1BQ92637 280 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 ACY3Q96HD9 319 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 FAM212BQ9NTI7 297 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-206ENST00000531430 U3KQE9 123 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 HLA-DRB4X5D2U9 266 aa6.54□□□□□ -1.36
NEDD8-206ENST00000531430 NACAE9PAV3 2078 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 C3orf85A0A1B0GTC6 90 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 SMIM31A0A1B0GVY4 71 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 F5H768 121 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 F6UB75 175 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 PRM2P04554 102 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 DEFB130BP0DP73 79 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 DEFB130AP0DP74 79 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 NAT1P18440 290 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 NKX2-1P43699 371 aaPredicted RBP6.53□□□□□ -1.36
NEDD8-206ENST00000531430 PIGPP57054 158 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 GABARAPL2P60520 117 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 LSM3P62310 102 aaKnown RBP6.53□□□□□ -1.36
NEDD8-206ENST00000531430 PSG9Q00887 426 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 EBLN2Q6P2I7 272 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 PRSS54Q6PEW0 395 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 OR51G1Q8NGK1 321 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 NPIPB3Q92617 1050 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 PPP1R14BQ96C90 147 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 TP53RKQ96S44 253 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 KLK11Q9UBX7 282 aa6.53□□□□□ -1.36
NEDD8-206ENST00000531430 CEBPZOSA8MTT3 80 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 BUB3O43684 328 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 GSTZ1O43708 216 aaPredicted RBP6.52□□□□□ -1.37
NEDD8-206ENST00000531430 NXPH3O95157 252 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 IGLC1P0CG04 106 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 TGFBR1P36897 503 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 HTR2BP41595 481 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 RORCP51449 518 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 CCL18P55774 89 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 UCP3P55916 312 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 YPEL3P61236 119 aaPredicted RBP6.52□□□□□ -1.37
NEDD8-206ENST00000531430 CLINT1Q14677 625 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 FCN2Q15485 313 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 NEDD8Q15843 81 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 FAM78BQ5VT40 261 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 C1orf158Q8N1D5 194 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 C15orf53Q8NAA6 179 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 WDR12Q9GZL7 423 aaKnown RBP6.52□□□□□ -1.37
NEDD8-206ENST00000531430 SAV1Q9H4B6 383 aaPredicted RBP6.52□□□□□ -1.37
NEDD8-206ENST00000531430 SEPSECSQ9HD40 501 aaKnown RBP6.52□□□□□ -1.37
NEDD8-206ENST00000531430 COPZ2Q9P299 210 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 COMMD3Q9UBI1 195 aa6.52□□□□□ -1.37
NEDD8-206ENST00000531430 HERC1Q15751 4861 aa6.51□□□□□ -1.37
NEDD8-206ENST00000531430 LRP1BQ9NZR2 4599 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms