RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 OR4E1P0C645 316 aa13.97□□□□□ -0.17
PTPRU-211ENST00000531385 UBE2MP61081 183 aaKnown RBP13.97□□□□□ -0.17
PTPRU-211ENST00000531385 ODF3L2Q3SX64 289 aa13.97□□□□□ -0.17
PTPRU-211ENST00000531385 GBGT1Q8N5D6 347 aa13.97□□□□□ -0.17
PTPRU-211ENST00000531385 NPIPB3Q92617 1050 aa13.97□□□□□ -0.17
PTPRU-211ENST00000531385 C7orf50Q9BRJ6 194 aaKnown RBP13.97□□□□□ -0.17
PTPRU-211ENST00000531385 TMED3Q9Y3Q3 217 aa13.97□□□□□ -0.17
PTPRU-211ENST00000531385 KMT2CQ8NEZ4 4911 aaKnown RBP13.96□□□□□ -0.17
PTPRU-211ENST00000531385 A6NHS1 94 aa13.96□□□□□ -0.17
PTPRU-211ENST00000531385 LYRM1O43325 122 aa13.96□□□□□ -0.17
PTPRU-211ENST00000531385 OR10J1P30954 320 aa13.96□□□□□ -0.17
PTPRU-211ENST00000531385 C4orf46Q504U0 113 aa13.96□□□□□ -0.17
PTPRU-211ENST00000531385 TCF24Q7RTU0 167 aa13.96□□□□□ -0.17
PTPRU-211ENST00000531385 LYG2Q86SG7 212 aa13.96□□□□□ -0.17
PTPRU-211ENST00000531385 SPATA25Q9BR10 227 aa13.96□□□□□ -0.17
PTPRU-211ENST00000531385 CACFD1Q9UGQ2 172 aa13.96□□□□□ -0.17
PTPRU-211ENST00000531385 PAIP2BQ9ULR5 123 aaKnown RBP13.96□□□□□ -0.17
PTPRU-211ENST00000531385 U3KQ87 197 aa13.96□□□□□ -0.17
PTPRU-211ENST00000531385 IFNA4P05014 189 aa13.95□□□□□ -0.18
PTPRU-211ENST00000531385 SLC25A4P12235 298 aa13.95□□□□□ -0.18
PTPRU-211ENST00000531385 SLC25A6P12236 298 aa13.95□□□□□ -0.18
PTPRU-211ENST00000531385 FAM90A2PQ658T7 463 aa13.95□□□□□ -0.18
PTPRU-211ENST00000531385 OR1S2Q8NGQ3 325 aa13.95□□□□□ -0.18
PTPRU-211ENST00000531385 C20orf85Q9H1P6 137 aa13.95□□□□□ -0.18
PTPRU-211ENST00000531385 PIGBOS1A0A0B4J2F0 54 aa13.94□□□□□ -0.18
PTPRU-211ENST00000531385 OR4C46A6NHA9 309 aa13.94□□□□□ -0.18
PTPRU-211ENST00000531385 WRBO00258 174 aa13.94□□□□□ -0.18
PTPRU-211ENST00000531385 DFFBO76075 338 aa13.94□□□□□ -0.18
PTPRU-211ENST00000531385 ZNF124Q15973 351 aa13.94□□□□□ -0.18
PTPRU-211ENST00000531385 NOXA1Q86UR1 476 aa13.94□□□□□ -0.18
PTPRU-211ENST00000531385 WFDC3Q8IUB2 231 aa13.94□□□□□ -0.18
PTPRU-211ENST00000531385 VSIRQ9H7M9 311 aa13.94□□□□□ -0.18
PTPRU-211ENST00000531385 TRAV6A0A075B6T7 132 aa13.93□□□□□ -0.18
PTPRU-211ENST00000531385 H3BP45 60 aa13.93□□□□□ -0.18
PTPRU-211ENST00000531385 ETFRF1Q6IPR1 90 aa13.93□□□□□ -0.18
PTPRU-211ENST00000531385 COQ8AQ8NI60 647 aa13.93□□□□□ -0.18
PTPRU-211ENST00000531385 TRAV30A0A087WSZ9 112 aa13.92□□□□□ -0.18
PTPRU-211ENST00000531385 FAM90A26D6RGX4 464 aa13.92□□□□□ -0.18
PTPRU-211ENST00000531385 SYNGR2O43760 224 aa13.92□□□□□ -0.18
PTPRU-211ENST00000531385 SCGB2A1O75556 95 aa13.92□□□□□ -0.18
PTPRU-211ENST00000531385 NPPCP23582 126 aa13.92□□□□□ -0.18
PTPRU-211ENST00000531385 APRG1Q8IVJ8 170 aa13.92□□□□□ -0.18
PTPRU-211ENST00000531385 METTL26Q96S19 204 aa13.92□□□□□ -0.18
PTPRU-211ENST00000531385 CCDC32Q9BV29 185 aa13.92□□□□□ -0.18
PTPRU-211ENST00000531385 GGTLC1Q9BX51 225 aa13.92□□□□□ -0.18
PTPRU-211ENST00000531385 LOC102724200A0A096LPH7 203 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-211ENST00000531385 MED6O75586 246 aa13.91□□□□□ -0.18
PTPRU-211ENST00000531385 TCRBP04435 133 aa13.91□□□□□ -0.18
PTPRU-211ENST00000531385 POLR2GP62487 172 aaKnown RBP eCLIP13.91□□□□□ -0.18
PTPRU-211ENST00000531385 RPL11P62913 178 aaKnown RBP13.91□□□□□ -0.18
PTPRU-211ENST00000531385 GAMTQ14353 236 aa13.91□□□□□ -0.18
PTPRU-211ENST00000531385 USF2Q15853 346 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-211ENST00000531385 FAM24BQ8N5W8 94 aa13.91□□□□□ -0.18
PTPRU-211ENST00000531385 TBC1D24Q9ULP9 559 aa13.91□□□□□ -0.18
PTPRU-211ENST00000531385 IL4P05112 153 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 RPL35AP18077 110 aaKnown RBP13.9□□□□□ -0.18
PTPRU-211ENST00000531385 CRYBB3P26998 211 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 BMI1P35226 326 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 P2RY1P47900 373 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 YPEL3P61236 119 aaPredicted RBP13.9□□□□□ -0.18
PTPRU-211ENST00000531385 SPANXN5Q5MJ07 72 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 OR4D5Q8NGN0 318 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 Q8WTZ3 238 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 SLC35E1Q96K37 410 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 SEC22CQ9BRL7 303 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 MS4A6AQ9H2W1 248 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 NUDT15Q9NV35 164 aa13.9□□□□□ -0.18
PTPRU-211ENST00000531385 IGKV1D-37A0A075B6S9 117 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 CCSO14618 274 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 TOMM40O96008 361 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 IFNA21P01568 189 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 PSG1P11464 419 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 RAB11AP62491 216 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 ZNF90Q03938 601 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 CIB3Q96Q77 187 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-211ENST00000531385 MAP6D1Q9H9H5 199 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 EDA2RQ9HAV5 297 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 STARD9Q9P2P6 4700 aa13.89□□□□□ -0.19
PTPRU-211ENST00000531385 ZFP92A6NM28 416 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 SSSCA1O60232 199 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 SCGB1D2O95969 90 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 RD3LP0DJH9 198 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 GPX4P36969 197 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-211ENST00000531385 STXBP6Q8NFX7 210 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 OR51G1Q8NGK1 321 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 MUC7Q8TAX7 377 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 MITD1Q8WV92 249 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 S100ZQ8WXG8 99 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 TMEM231Q9H6L2 316 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 PTTG2Q9NZH5 202 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 RABAC1Q9UI14 185 aa13.88□□□□□ -0.19
PTPRU-211ENST00000531385 A0A1W2PS18 150 aa13.87□□□□□ -0.19
PTPRU-211ENST00000531385 PRSS46E5RG02 174 aa13.87□□□□□ -0.19
PTPRU-211ENST00000531385 DNASE2O00115 360 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-211ENST00000531385 HNRNPCP07910 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
PTPRU-211ENST00000531385 NKX2-1P43699 371 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-211ENST00000531385 ATP5IP56385 69 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-211ENST00000531385 ID3Q02535 119 aa13.87□□□□□ -0.19
PTPRU-211ENST00000531385 OR2F1Q13607 317 aa13.87□□□□□ -0.19
PTPRU-211ENST00000531385 IAH1Q2TAA2 248 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms