RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 CROCCP3Q8IVE0 287 aa9.47□□□□□ -0.89
HIF3A-214ENST00000531043 TMEM170AQ8WVE7 144 aa9.47□□□□□ -0.89
HIF3A-214ENST00000531043 YIPF6Q96EC8 236 aa9.47□□□□□ -0.89
HIF3A-214ENST00000531043 COMMD3Q9UBI1 195 aa9.47□□□□□ -0.89
HIF3A-214ENST00000531043 C3orf85A0A1B0GTC6 90 aa9.46□□□□□ -0.9
HIF3A-214ENST00000531043 IGKV3-20P01619 116 aa9.46□□□□□ -0.9
HIF3A-214ENST00000531043 ZNF705AQ6ZN79 300 aaPredicted RBP9.46□□□□□ -0.9
HIF3A-214ENST00000531043 OR4D10Q8NGI6 311 aa9.46□□□□□ -0.9
HIF3A-214ENST00000531043 NARS2Q96I59 477 aaKnown RBP9.46□□□□□ -0.9
HIF3A-214ENST00000531043 SCPEP1Q9HB40 452 aa9.46□□□□□ -0.9
HIF3A-214ENST00000531043 ENY2Q9NPA8 101 aa9.46□□□□□ -0.9
HIF3A-214ENST00000531043 KLK11Q9UBX7 282 aa9.46□□□□□ -0.9
HIF3A-214ENST00000531043 IGHV3OR16-12A0A075B7B8 117 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 ZNF705FA8MVS1 300 aaPredicted RBP9.45□□□□□ -0.9
HIF3A-214ENST00000531043 HPGDSO60760 199 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 ATP6V1G2O95670 118 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 IFNA10P01566 189 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 ZNF705DP0CH99 300 aaPredicted RBP9.45□□□□□ -0.9
HIF3A-214ENST00000531043 ZNF705BP0CI00 300 aaPredicted RBP9.45□□□□□ -0.9
HIF3A-214ENST00000531043 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 ELK1P19419 428 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 NPY1RP25929 384 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 OR10J1P30954 320 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 TRIM16LQ309B1 348 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 KCTD21Q4G0X4 260 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 OR1S2Q8NGQ3 325 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 LHFPL5Q8TAF8 219 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 PDCD10Q9BUL8 212 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
HIF3A-214ENST00000531043 TRAV30A0A087WSZ9 112 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 BUB3O43684 328 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 APOA1P02647 267 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 CD3DP04234 171 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 IL4P05112 153 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 SPART-AS1P0CW21 52 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 HTN3P15516 51 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 UCP1P25874 307 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 YPEL3P61236 119 aaPredicted RBP9.44□□□□□ -0.9
HIF3A-214ENST00000531043 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 OR13C8Q8NGS7 320 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 Q8WTZ3 238 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 NEU1Q99519 415 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 WDR12Q9GZL7 423 aaKnown RBP9.44□□□□□ -0.9
HIF3A-214ENST00000531043 Q9H521 79 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 NRN1Q9NPD7 142 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 DKK2Q9UBU2 259 aa9.44□□□□□ -0.9
HIF3A-214ENST00000531043 EIF2B2P49770 351 aaKnown RBP9.43□□□□□ -0.9
HIF3A-214ENST00000531043 SPCS3P61009 180 aa9.43□□□□□ -0.9
HIF3A-214ENST00000531043 NCS1P62166 190 aa9.43□□□□□ -0.9
HIF3A-214ENST00000531043 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
HIF3A-214ENST00000531043 AARDQ4LEZ3 155 aa9.43□□□□□ -0.9
HIF3A-214ENST00000531043 FAM222AQ5U5X8 452 aa9.43□□□□□ -0.9
HIF3A-214ENST00000531043 ZNF709Q8N972 641 aa9.43□□□□□ -0.9
HIF3A-214ENST00000531043 OR52I2Q8NH67 350 aa9.43□□□□□ -0.9
HIF3A-214ENST00000531043 NPIPB3Q92617 1050 aa9.43□□□□□ -0.9
HIF3A-214ENST00000531043 ZNF486Q96H40 463 aaPredicted RBP9.43□□□□□ -0.9
HIF3A-214ENST00000531043 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
HIF3A-214ENST00000531043 SMIM31A0A1B0GVY4 71 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 RPS10-NUDT3A0A1W2PQS6 291 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 IFNA21P01568 189 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 OR5AC1P0C628 307 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 HTR2BP41595 481 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 AP2S1P53680 142 aaPredicted RBP9.42□□□□□ -0.9
HIF3A-214ENST00000531043 NUTF2P61970 127 aaKnown RBP9.42□□□□□ -0.9
HIF3A-214ENST00000531043 C2orf83Q53S99 150 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 RNASE10Q5GAN6 216 aaKnown RBP9.42□□□□□ -0.9
HIF3A-214ENST00000531043 SIGLEC15Q6ZMC9 328 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 OR51G1Q8NGK1 321 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 RNASE11Q8TAA1 199 aaKnown RBP9.42□□□□□ -0.9
HIF3A-214ENST00000531043 GPR146Q96CH1 333 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 RRNAD1Q96FB5 475 aaKnown RBP9.42□□□□□ -0.9
HIF3A-214ENST00000531043 NIPSNAP3BQ9BS92 247 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 SLC35B3Q9H1N7 401 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 COPZ2Q9P299 210 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 CACNG5Q9UF02 275 aa9.42□□□□□ -0.9
HIF3A-214ENST00000531043 APOBP04114 4563 aaKnown RBP9.42□□□□□ -0.9
HIF3A-214ENST00000531043 F6UB75 175 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 SCGB2A1O75556 95 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 ATG12O94817 140 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 TOMM40O96008 361 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 RD3LP0DJH9 198 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 NKX2-1P43699 371 aaPredicted RBP9.41□□□□□ -0.9
HIF3A-214ENST00000531043 TNP2Q05952 138 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 MEF2DQ14814 521 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 TMEM88Q6PEY1 159 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 SLC24A4Q8NFF2 622 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 OR52E5Q8NH55 327 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 MARCH1Q8TCQ1 289 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 GLYATL2Q8WU03 294 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 ACY3Q96HD9 319 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 LINC00052Q96N35 136 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
HIF3A-214ENST00000531043 HEYLQ9NQ87 328 aaPredicted RBP9.41□□□□□ -0.9
HIF3A-214ENST00000531043 RFNGQ9Y644 331 aa9.41□□□□□ -0.9
HIF3A-214ENST00000531043 SOCS3O14543 225 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 CDS2O95674 445 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 PRM2P04554 102 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 PSG1P11464 419 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 SLC25A4P12235 298 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms