RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 SLC35A3Q9Y2D2 325 aa1.12□□□□□ -2.23
FGFR1-235ENST00000530701 AMMECR1Q9Y4X0 333 aaPredicted RBP1.12□□□□□ -2.23
FGFR1-235ENST00000530701 RP1P56715 2156 aa1.12□□□□□ -2.23
FGFR1-235ENST00000530701 NUP98P52948 1817 aa1.12□□□□□ -2.23
FGFR1-235ENST00000530701 NUMA1Q14980 2115 aa1.12□□□□□ -2.23
FGFR1-235ENST00000530701 SBF1O95248 1867 aa1.12□□□□□ -2.23
FGFR1-235ENST00000530701 PLXNA3P51805 1871 aa1.12□□□□□ -2.23
FGFR1-235ENST00000530701 CCDC88CQ9P219 2028 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 COL11A1P12107 1806 aaPredicted RBP1.11□□□□□ -2.23
FGFR1-235ENST00000530701 TMSB15BA0A087X1C1 80 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 TRGV4A0A0C4DH28 118 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 MUC21A0A0G2JKD1 596 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 MUC21A0A140T8X8 626 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 FUOMA2VDF0 154 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 C7orf71A4D174 169 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 MEIS3P1A6NDR6 274 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 ARL5CA6NH57 179 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 ZNF860A6NHJ4 632 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 BUB1B-PAK6H3BSN5 160 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 FAM107AO95990 144 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 PMP2P02689 132 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 P0C880 135 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 COX6A1P12074 109 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 DEFA4P12838 97 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 UBE2BP63146 152 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 SUPT4H1P63272 117 aaKnown RBP1.11□□□□□ -2.23
FGFR1-235ENST00000530701 SLC38A11Q08AI6 406 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 FAM27BQ5VT28 67 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 EIF5AL1Q6IS14 154 aaKnown RBP1.11□□□□□ -2.23
FGFR1-235ENST00000530701 HCP5Q6MZN7 132 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 LCN15Q6UWW0 184 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 Q6ZTI0 123 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 DEFB128Q7Z7B8 93 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 NUP35Q8NFH5 326 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 OR8B3Q8NGG8 313 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 OR4D11Q8NGI4 311 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 OR5A1Q8NGJ0 315 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 OR2T10Q8NGZ9 312 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 CANT1Q8WVQ1 401 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 ISOC1Q96CN7 298 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 PLEKHB2Q96CS7 222 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 LAMTOR2Q9Y2Q5 125 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 RIC1Q4ADV7 1423 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 ANKRD31Q8N7Z5 1873 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 SCN3AQ9NY46 2000 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 DENND4BO75064 1496 aaPredicted RBP1.11□□□□□ -2.23
FGFR1-235ENST00000530701 ZCCHC11Q5TAX3 1644 aaKnown RBP1.11□□□□□ -2.23
FGFR1-235ENST00000530701 HEATR5BQ9P2D3 2071 aa1.11□□□□□ -2.23
FGFR1-235ENST00000530701 TANC2Q9HCD6 1990 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 XIRP1Q702N8 1843 aaKnown RBP1.1□□□□□ -2.23
FGFR1-235ENST00000530701 ADGBQ8N7X0 1667 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 MED1Q15648 1581 aaPredicted RBP1.1□□□□□ -2.23
FGFR1-235ENST00000530701 MEIKINA0A087WXM9 373 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 A0A0D9SEW6 157 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 OR51F1A6NGY5 319 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 TMEM212A6NML5 194 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 LY6LH3BQJ8 138 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 LGALS3P17931 250 aaKnown RBP1.1□□□□□ -2.23
FGFR1-235ENST00000530701 PEBP1P30086 187 aaKnown RBP1.1□□□□□ -2.23
FGFR1-235ENST00000530701 SRIP30626 198 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 KRTAP10-7P60409 375 aaPredicted RBP1.1□□□□□ -2.23
FGFR1-235ENST00000530701 RAB4BP61018 213 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 SARNPP82979 210 aaKnown RBP1.1□□□□□ -2.23
FGFR1-235ENST00000530701 FOXF1Q12946 379 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 KISS1Q15726 138 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 RTL8BQ17RB0 113 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 TMEM128Q5BJH2 165 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 SPANXN5Q5MJ07 72 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 TMEM78Q5T7P6 136 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 BRD3OSQ6XYD6 125 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 TMEM35BQ8NCS4 154 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 PFN4Q8NHR9 129 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 LZICQ8WZA0 190 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 EFCAB11Q9BUY7 163 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 RTL8AQ9BWD3 113 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 SPANXCQ9NY87 97 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 BAIAP2Q9UQB8 552 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 NDUFAF1Q9Y375 327 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 MDC1Q14676 2089 aaKnown RBP1.1□□□□□ -2.23
FGFR1-235ENST00000530701 PCNX2A6NKB5 2137 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 CAMSAP2Q08AD1 1489 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 SLIT2O94813 1529 aa1.1□□□□□ -2.23
FGFR1-235ENST00000530701 RTTNQ86VV8 2226 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 MYLKQ15746 1914 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 FHAD1B1AJZ9 1412 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 FREM1Q5H8C1 2179 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 IGLV3-9A0A075B6K5 115 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 A0A1B0GVG6 124 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 TLCD2A6NGC4 264 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 C3orf84H3BNL1 204 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 J3QRE1 110 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 NDUFB3O43676 98 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 CST7O76096 145 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 PROSCO94903 275 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 TRGC2P03986 189 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 IGKV1-16P04430 117 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 IFNA4P05014 189 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 UBBP0CG47 229 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 AQP4P55087 323 aa1.09□□□□□ -2.23
FGFR1-235ENST00000530701 ZNF791Q3KP31 576 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms