RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 HIST3H3Q16695 136 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 FAM74A1Q5RGS3 127 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 LINC00575Q6W349 94 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 LINC00322Q6ZN03 302 aaPredicted RBP0.06□□□□□ -2.4
NUP98-218ENST00000530516 TRAPPC6BQ86SZ2 158 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 C20orf196Q8IYI0 205 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 OR51D1Q8NGF3 324 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 SLC35B4Q969S0 331 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 TMEM56-RWDD3S4R434 201 aa0.06□□□□□ -2.4
NUP98-218ENST00000530516 MACF1Q9UPN3 7388 aaKnown RBP0.06□□□□□ -2.4
NUP98-218ENST00000530516 TRBV6-4A0A1B0GX49 114 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 C7orf71A4D174 169 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 BUB1B-PAK6H3BSN5 160 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 CCL25O15444 150 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 DNAL4O96015 105 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 HIST1H1TP22492 207 aaPredicted RBP0.05□□□□□ -2.4
NUP98-218ENST00000530516 TCL1AP56279 114 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 YPEL3P61236 119 aaPredicted RBP0.05□□□□□ -2.4
NUP98-218ENST00000530516 CIRBPQ14011 172 aaKnown RBP0.05□□□□□ -2.4
NUP98-218ENST00000530516 ALKAL1Q6UXT8 129 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 LCA10Q71F78 164 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 LINC00301Q8NCQ3 95 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 OR13D1Q8NGV5 346 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 KLK6Q92876 244 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 C20orf27Q9GZN8 174 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 C11orf68Q9H3H3 251 aaKnown RBP0.05□□□□□ -2.4
NUP98-218ENST00000530516 C14orf132Q9NPU4 83 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 OSTCQ9NRP0 149 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 CMTM6Q9NX76 183 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 NKIRAS1Q9NYS0 192 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 TMEM14CQ9P0S9 112 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 EPDR1Q9UM22 224 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 HECW2Q9P2P5 1572 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 UNC13CQ8NB66 2214 aa0.05□□□□□ -2.4
NUP98-218ENST00000530516 MUC12Q9UKN1 5478 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 ZDBF2Q9HCK1 2354 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 SPTBP11277 2137 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 MUC4Q99102 2169 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 NUP210LQ5VU65 1888 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 LINC00854A0A1B0GVQ3 168 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 OR2J2O76002 312 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 IGLV3-1P01715 115 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 RPL5P46777 297 aaKnown RBP0.04□□□□□ -2.4
NUP98-218ENST00000530516 SPCS3P61009 180 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 MAGOHP61326 146 aaKnown RBP0.04□□□□□ -2.4
NUP98-218ENST00000530516 ESRGQ1W209 222 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 DEFB113Q30KQ7 82 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 SPRNQ5BIV9 151 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 SPINK9Q5DT21 86 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 HIST2H3PS2Q5TEC6 136 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 SPOPLQ6IQ16 392 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 TSPAN32Q96QS1 320 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 MRPS26Q9BYN8 205 aaKnown RBP0.04□□□□□ -2.4
NUP98-218ENST00000530516 DCSTAMPQ9H295 470 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 OR51V1Q9H2C8 321 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 V9GYY5 206 aaPredicted RBP0.04□□□□□ -2.4
NUP98-218ENST00000530516 PTPRDP23468 1912 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 RIMBP3CA6NJZ7 1639 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 RIMBP3BA6NNM3 1639 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 RIMBP3Q9UFD9 1639 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 BCORL1Q5H9F3 1711 aa0.04□□□□□ -2.4
NUP98-218ENST00000530516 NUP98P52948 1817 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 IGLV3-32A0A0A0MS00 114 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 TRAV3A0A0B4J244 114 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 OR2T8A6NH00 312 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 PIRO00625 290 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 CCL16O15467 120 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 CRYZL1O95825 349 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 CALB1P05937 261 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 RBP1P09455 135 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 OR4E1P0C645 316 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 SMIM10L2AP0DMW4 78 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 SMIM10L2BP0DMW5 78 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 ANP32AP39687 249 aaKnown RBP0.03□□□□□ -2.4
NUP98-218ENST00000530516 TSNQ15631 228 aaKnown RBP0.03□□□□□ -2.4
NUP98-218ENST00000530516 LINC01554Q52M75 96 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 BRMS1LQ5PSV4 323 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 CLECL1Q8IZS7 167 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 EXOC3-AS1Q8N2X6 119 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 TMEM86BQ8N661 226 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 ANKRD29Q8N6D5 301 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 OR11H6Q8NGC7 330 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 OR2T10Q8NGZ9 312 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 TMEM254Q8TBM7 123 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 PTH2Q96A98 100 aa0.03□□□□□ -2.4
NUP98-218ENST00000530516 C6orf62Q9GZU0 229 aaPredicted RBP0.03□□□□□ -2.4
NUP98-218ENST00000530516 WRNQ14191 1432 aaPredicted RBP eCLIP0.03□□□□□ -2.41
NUP98-218ENST00000530516 FREM3P0C091 2139 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 A0A087X0T9 212 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 IGHV1-58A0A0C4DH39 117 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 A0A0D9SG42 100 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 NUPR1O60356 82 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 DHFRP00374 187 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 TNNC2P02585 160 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 TPM3P06753 285 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 HIST1H1EP10412 219 aaKnown RBP0.02□□□□□ -2.41
NUP98-218ENST00000530516 SULT1A1P50225 295 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 OR2F1Q13607 317 aa0.02□□□□□ -2.41
NUP98-218ENST00000530516 HAGHLQ6PII5 290 aaPredicted RBP0.02□□□□□ -2.41
NUP98-218ENST00000530516 C2orf82Q6UX34 121 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms