RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 TMEM235A6NFC5 223 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 P0C879 139 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 ARPC4P59998 168 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 CATR1Q13166 79 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 C22orf42Q6IC83 251 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 NUDCD2Q8WVJ2 157 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 GLMPQ8WWB7 406 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 BORCS5Q969J3 196 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 PINX1Q96BK5 328 aaKnown RBP9.24□□□□□ -0.93
SSRP1-203ENST00000526696 METTL26Q96S19 204 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 TMEM70Q9BUB7 260 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 FNDC4Q9H6D8 234 aaPredicted RBP9.24□□□□□ -0.93
SSRP1-203ENST00000526696 U3KQE9 123 aa9.24□□□□□ -0.93
SSRP1-203ENST00000526696 A0A0A6YYH2 397 aa9.23□□□□□ -0.93
SSRP1-203ENST00000526696 A6NJ64 397 aa9.23□□□□□ -0.93
SSRP1-203ENST00000526696 TMEM50AO95807 157 aa9.23□□□□□ -0.93
SSRP1-203ENST00000526696 OXTP01178 125 aa9.23□□□□□ -0.93
SSRP1-203ENST00000526696 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
SSRP1-203ENST00000526696 PLEKHA2Q9HB19 425 aa9.23□□□□□ -0.93
SSRP1-203ENST00000526696 RSL24D1Q9UHA3 163 aaKnown RBP9.23□□□□□ -0.93
SSRP1-203ENST00000526696 MRPS16Q9Y3D3 137 aaKnown RBP9.23□□□□□ -0.93
SSRP1-203ENST00000526696 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
SSRP1-203ENST00000526696 PLAC8L1A1L4L8 177 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 LYRM9A8MSI8 78 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 SSX5O60225 188 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 PSMB9P28065 219 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 SNRPD3P62318 126 aaKnown RBP9.22□□□□□ -0.93
SSRP1-203ENST00000526696 RNASE12Q5GAN4 147 aaKnown RBP9.22□□□□□ -0.93
SSRP1-203ENST00000526696 GPR107Q5VW38 600 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 C16orf54Q6UWD8 224 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 CLVS1Q8IUQ0 354 aaPredicted RBP9.22□□□□□ -0.93
SSRP1-203ENST00000526696 CADM3Q8N126 398 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 BEST4Q8NFU0 473 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 RAB2BQ8WUD1 216 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 SECTM1Q8WVN6 248 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 C7orf50Q9BRJ6 194 aaKnown RBP9.22□□□□□ -0.93
SSRP1-203ENST00000526696 FUNDC2Q9BWH2 189 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 TXNL4BQ9NX01 149 aaKnown RBP9.22□□□□□ -0.93
SSRP1-203ENST00000526696 RHBDL2Q9NX52 303 aa9.22□□□□□ -0.93
SSRP1-203ENST00000526696 MRPL36Q9P0J6 103 aaKnown RBP9.22□□□□□ -0.93
SSRP1-203ENST00000526696 MARCH11A6NNE9 402 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 GABARAPO95166 117 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 PPYP01298 95 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 ATP5G1P05496 136 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 FCGR2CP31995 323 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 NKX2-1P43699 371 aaPredicted RBP9.21□□□□□ -0.94
SSRP1-203ENST00000526696 ATP5G3P48201 142 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 SFXN4Q6P4A7 337 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 LINC00528Q8N1L1 170 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 ZNF114Q8NC26 417 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 OR51H1Q8NH63 302 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 KRTAP9-2Q9BYQ4 174 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 SAV1Q9H4B6 383 aaPredicted RBP9.21□□□□□ -0.94
SSRP1-203ENST00000526696 SEPSECSQ9HD40 501 aaKnown RBP9.21□□□□□ -0.94
SSRP1-203ENST00000526696 COMMD9Q9P000 198 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 DAPK2Q9UIK4 370 aa9.21□□□□□ -0.94
SSRP1-203ENST00000526696 ZNF705GA8MUZ8 300 aaPredicted RBP9.2□□□□□ -0.94
SSRP1-203ENST00000526696 TMEM127O75204 238 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 PTHLHP12272 177 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 NPBWR1P48145 328 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 KRTAP10-4P60372 401 aaPredicted RBP9.2□□□□□ -0.94
SSRP1-203ENST00000526696 CTF1Q16619 201 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 CNPY1Q3B7I2 92 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 HOGA1Q86XE5 327 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 LGALS14Q8TCE9 139 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 RNF125Q96EQ8 232 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 TMEM56Q96MV1 263 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 CLUHP3Q96NS8 147 aa9.2□□□□□ -0.94
SSRP1-203ENST00000526696 H3BMQ9 156 aa9.19□□□□□ -0.94
SSRP1-203ENST00000526696 CBX5P45973 191 aa9.19□□□□□ -0.94
SSRP1-203ENST00000526696 HOXA1P49639 335 aaPredicted RBP9.19□□□□□ -0.94
SSRP1-203ENST00000526696 ZNF79Q15937 498 aa9.19□□□□□ -0.94
SSRP1-203ENST00000526696 SLC5A7Q9GZV3 580 aa9.19□□□□□ -0.94
SSRP1-203ENST00000526696 NRN1Q9NPD7 142 aa9.19□□□□□ -0.94
SSRP1-203ENST00000526696 SSR3Q9UNL2 185 aa9.19□□□□□ -0.94
SSRP1-203ENST00000526696 SMIM30A4D0T7 59 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 CCDC160A6NGH7 325 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 CBY3A6NI87 242 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 NOL3O60936 208 aaKnown RBP9.18□□□□□ -0.94
SSRP1-203ENST00000526696 AZU1P20160 251 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 G6PCP35575 357 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 ERVK-16P61578 105 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 ZNF818PQ6ZRF7 136 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 OR5AP2Q8NGF4 316 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 OR4B1Q8NGF8 309 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 NAA50Q9GZZ1 169 aaKnown RBP9.18□□□□□ -0.94
SSRP1-203ENST00000526696 MAGT1Q9H0U3 335 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 DIABLOQ9NR28 239 aa9.18□□□□□ -0.94
SSRP1-203ENST00000526696 TRAV18A0A075B6X5 111 aa9.17□□□□□ -0.94
SSRP1-203ENST00000526696 TRAV26-1A0A087WT03 109 aa9.17□□□□□ -0.94
SSRP1-203ENST00000526696 F6UB75 175 aa9.17□□□□□ -0.94
SSRP1-203ENST00000526696 KRASP01116 189 aa9.17□□□□□ -0.94
SSRP1-203ENST00000526696 IGKV1-17P01599 117 aa9.17□□□□□ -0.94
SSRP1-203ENST00000526696 EIF2B2P49770 351 aaKnown RBP9.17□□□□□ -0.94
SSRP1-203ENST00000526696 AP2S1P53680 142 aaPredicted RBP9.17□□□□□ -0.94
SSRP1-203ENST00000526696 PSG9Q00887 426 aa9.17□□□□□ -0.94
SSRP1-203ENST00000526696 MLANAQ16655 118 aa9.17□□□□□ -0.94
SSRP1-203ENST00000526696 AADACL3Q5VUY0 350 aa9.17□□□□□ -0.94
SSRP1-203ENST00000526696 FOXI2Q6ZQN5 318 aa9.17□□□□□ -0.94
SSRP1-203ENST00000526696 RXFP4Q8TDU9 374 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms