RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 MAGI1Q96QZ7 1491 aaPredicted RBP2.14□□□□□ -2.07
CSDE1-211ENST00000525970 MYH11P35749 1972 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 ARHGEF10O15013 1369 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 MAP3K4Q9Y6R4 1608 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 EFCAB6Q5THR3 1501 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 LMTK2Q8IWU2 1503 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 IGKV3D-11A0A0A0MRZ8 115 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 A0A0D9SFI3 127 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 TRAPPC13A5PLN9 417 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 GGT3PA6NGU5 568 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 FABP5P3A8MUU1 101 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 C3orf84H3BNL1 204 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 BUB1B-PAK6H3BSN5 160 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 PGRMC1O00264 195 aaKnown RBP2.14□□□□□ -2.07
CSDE1-211ENST00000525970 MSMBP08118 114 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 PPIBP23284 216 aaKnown RBP2.14□□□□□ -2.07
CSDE1-211ENST00000525970 PSMB8P28062 276 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 ZNF80P51504 273 aaPredicted RBP2.14□□□□□ -2.07
CSDE1-211ENST00000525970 MEF2BQ02080 365 aaPredicted RBP2.14□□□□□ -2.07
CSDE1-211ENST00000525970 CCDC153Q494R4 210 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 PABPC1L2AQ5JQF8 200 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 LYZL1Q6UWQ5 148 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 ZNF705AQ6ZN79 300 aaPredicted RBP2.14□□□□□ -2.07
CSDE1-211ENST00000525970 Q6ZS52 159 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 OR5J2Q8NH18 312 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 NEK7Q8TDX7 302 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 ACOT12Q8WYK0 555 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 GID8Q9NWU2 228 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 MYO9BQ13459 2157 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 OVOS2A0A0G2JMS6 1433 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 OVOS2A0A0J9YW53 1432 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 OVOS2Q6IE36 1432 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 CDC42BPGQ6DT37 1551 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 UGGT1Q9NYU2 1555 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 BICRAQ9NZM4 1560 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 PTPRBP23467 1997 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 ANKRD26Q9UPS8 1709 aa2.14□□□□□ -2.07
CSDE1-211ENST00000525970 DEPDC5O75140 1603 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 MYO3AQ8NEV4 1616 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 ABCC1P33527 1531 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 AGLP35573 1532 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 DISP1Q96F81 1524 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 TRAV4A0A0B4J268 109 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 SMIM31A0A1B0GVY4 71 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 IRGMA1A4Y4 181 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 S1PR2O95136 353 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 IFNA10P01566 189 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 FABP1P07148 127 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 PAEPP09466 180 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 OR4E1P0C645 316 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 SULT1A3P0DMM9 295 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 SULT1A4P0DMN0 295 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 IDO1P14902 403 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 DR1Q01658 176 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 NDUFA5Q16718 116 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 Q6Q795 121 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 IZUMO2Q6UXV1 221 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 GPR146Q96CH1 333 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 CCDC90BQ9GZT6 254 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 ADAMTS12P58397 1594 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 IFT172Q9UG01 1749 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 PXDNLA1KZ92 1463 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 ATP7BP35670 1465 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 PREX2Q70Z35 1606 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 MYH2Q9UKX2 1941 aa2.13□□□□□ -2.07
CSDE1-211ENST00000525970 PREX1Q8TCU6 1659 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 ABCC3O15438 1527 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 ADGRB3O60242 1522 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.12□□□□□ -2.07
CSDE1-211ENST00000525970 MED23Q9ULK4 1368 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 CCDC88AQ3V6T2 1871 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 SETBP1Q9Y6X0 1596 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 IGHV3-64A0A075B6Q5 118 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 TRAPPC2LH3BP13 241 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 IFNA1P01562 189 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 SHBGP04278 402 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 CDC42P60953 191 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 ZNF90Q03938 601 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 BRD3OSQ6XYD6 125 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 SLC35E3Q7Z769 313 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 RPP25LQ8N5L8 163 aaKnown RBP2.12□□□□□ -2.07
CSDE1-211ENST00000525970 TERB2Q8NHR7 220 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 SLC25A40Q8TBP6 338 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 DNAJC30Q96LL9 226 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 C2orf50Q96LR7 162 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 CXCL16Q9H2A7 254 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 NAT8Q9UHE5 227 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 ATPIF1Q9UII2 106 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 MYH3P11055 1940 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 MYH8P13535 1937 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 TET3O43151 1660 aa2.12□□□□□ -2.07
CSDE1-211ENST00000525970 PLXNA3P51805 1871 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 RFX7Q2KHR2 1363 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 TARBP1Q13395 1621 aaKnown RBP2.11□□□□□ -2.07
CSDE1-211ENST00000525970 TRAV38-1A0A0B4J264 116 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 TRAV41A0A0B4J266 112 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 IGHV1-18A0A0C4DH31 117 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 A0A0G2JND7 137 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 H7C2G1 150 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms