RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 MCRIP2Q9BUT9 160 aaKnown RBP11.42□□□□□ -0.58
LRRK1-202ENST00000525284 hADV29S1A0JD25 119 aa11.42□□□□□ -0.58
LRRK1-202ENST00000525284 LHBP01229 141 aa11.42□□□□□ -0.58
LRRK1-202ENST00000525284 IGHG3P01860 377 aa11.42□□□□□ -0.58
LRRK1-202ENST00000525284 UCNP55089 124 aa11.42□□□□□ -0.58
LRRK1-202ENST00000525284 YBX2Q9Y2T7 364 aaKnown RBP11.42□□□□□ -0.58
LRRK1-202ENST00000525284 SCN3AQ9NY46 2000 aa11.42□□□□□ -0.58
LRRK1-202ENST00000525284 KIF13BQ9NQT8 1826 aa11.42□□□□□ -0.58
LRRK1-202ENST00000525284 TRGV1A0A0A0MS02 117 aa11.42□□□□□ -0.58
LRRK1-202ENST00000525284 TIMM21Q9BVV7 248 aa11.42□□□□□ -0.58
LRRK1-202ENST00000525284 GZMMP51124 257 aa11.41□□□□□ -0.58
LRRK1-202ENST00000525284 SRSF8Q9BRL6 282 aaKnown RBP11.41□□□□□ -0.58
LRRK1-202ENST00000525284 FOXD3Q9UJU5 478 aaPredicted RBP11.41□□□□□ -0.58
LRRK1-202ENST00000525284 TSSC4Q9Y5U2 329 aaPredicted RBP11.41□□□□□ -0.58
LRRK1-202ENST00000525284 C1orf194Q5T5A4 169 aa11.41□□□□□ -0.58
LRRK1-202ENST00000525284 CLPSP04118 112 aa11.41□□□□□ -0.58
LRRK1-202ENST00000525284 RPL36AP83881 106 aaKnown RBP11.41□□□□□ -0.58
LRRK1-202ENST00000525284 C1QL2Q7Z5L3 287 aa11.41□□□□□ -0.58
LRRK1-202ENST00000525284 RPL36ALQ969Q0 106 aaKnown RBP11.41□□□□□ -0.58
LRRK1-202ENST00000525284 WFDC6Q9BQY6 131 aa11.41□□□□□ -0.58
LRRK1-202ENST00000525284 RTBDNQ9BSG5 229 aaPredicted RBP11.41□□□□□ -0.58
LRRK1-202ENST00000525284 PLAC1Q9HBJ0 212 aa11.41□□□□□ -0.58
LRRK1-202ENST00000525284 TRBV20-1A0A075B6N2 111 aa11.41□□□□□ -0.58
LRRK1-202ENST00000525284 APOBEC3AP31941 199 aaPredicted RBP11.41□□□□□ -0.58
LRRK1-202ENST00000525284 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.41□□□□□ -0.58
LRRK1-202ENST00000525284 PVRIGQ6DKI7 326 aa11.41□□□□□ -0.58
LRRK1-202ENST00000525284 MBNL3Q9NUK0 354 aaKnown RBP11.41□□□□□ -0.58
LRRK1-202ENST00000525284 TCRBV4S1A1TA0A5B7 111 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 RHOGP84095 191 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 TEX38Q6PEX7 206 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 FGF11Q92914 225 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 MMP23AO75900 390 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 CXCL1P09341 107 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 HEPN1Q6WQI6 88 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 SIGLEC15Q6ZMC9 328 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 RS1O15537 224 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 MORN5Q5VZ52 161 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 RNF222A6NCQ9 220 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 C1QAP02745 245 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 CXCL10P02778 98 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 CSTL1Q9H114 145 aa11.4□□□□□ -0.58
LRRK1-202ENST00000525284 ZNF646O15015 1829 aaPredicted RBP11.4□□□□□ -0.59
LRRK1-202ENST00000525284 NBR2O15453 112 aa11.4□□□□□ -0.59
LRRK1-202ENST00000525284 WNT2P09544 360 aa11.4□□□□□ -0.59
LRRK1-202ENST00000525284 CEACAM8P31997 349 aaPredicted RBP11.4□□□□□ -0.59
LRRK1-202ENST00000525284 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 TM4SF5O14894 197 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 UCP1P25874 307 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 LINC01549A6NIU2 74 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 CHKB-CPT1BH3BT56 60 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 NGFRP08138 427 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 CGB3P0DN86 165 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 LYZL1Q6UWQ5 148 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 RP1L1Q8IWN7 2480 aaPredicted RBP11.39□□□□□ -0.59
LRRK1-202ENST00000525284 ABCA3Q99758 1704 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 ZIC4Q8N9L1 334 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 DIDO1Q9BTC0 2240 aaKnown RBP11.39□□□□□ -0.59
LRRK1-202ENST00000525284 CDCP2Q5VXM1 449 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 MDC1Q14676 2089 aaKnown RBP11.39□□□□□ -0.59
LRRK1-202ENST00000525284 IQCF6A8MYZ5 107 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 RPL35AP18077 110 aaKnown RBP11.39□□□□□ -0.59
LRRK1-202ENST00000525284 TMEM158Q8WZ71 300 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 FAM168AQ92567 244 aa11.39□□□□□ -0.59
LRRK1-202ENST00000525284 INAFM2P0DMQ5 153 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 PMVKQ15126 192 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 C8orf46Q8TAG6 207 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 SCN9AQ15858 1988 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 OVOL1O14753 267 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 COX5BP10606 129 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 BAALCQ8WXS3 180 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 SS18Q15532 418 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 CT83Q5H943 113 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 CD200R1LQ6Q8B3 271 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 BMPERQ8N8U9 685 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 ZNF319Q9P2F9 582 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 CGB7P0DN87 165 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 SRSF7Q16629 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
LRRK1-202ENST00000525284 ZC2HC1BQ5TFG8 222 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 SAA2-SAA4A0A096LPE2 208 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 A0A1W2PPI3 338 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 UPK2O00526 184 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 GREM1O60565 184 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 SAA2P0DJI9 122 aaPredicted RBP11.38□□□□□ -0.59
LRRK1-202ENST00000525284 TIMP3P35625 211 aa11.38□□□□□ -0.59
LRRK1-202ENST00000525284 ZNF501Q96CX3 271 aaPredicted RBP11.38□□□□□ -0.59
LRRK1-202ENST00000525284 EFNB3Q15768 340 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 LINC00527Q9UJ94 153 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 ZNF318Q5VUA4 2279 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 FAM90A9PA6NNJ1 464 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 ANXA2RQ3ZCQ2 193 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 LINC01559Q495D7 138 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 F8VVB4 439 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 F8VWA3 439 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 SAP30O75446 220 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 C3orf79P0CE67 100 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 ZNF138P52744 262 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 DOCK1Q14185 1865 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 VCYO14598 125 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 ATP1A1-AS1Q5TC04 95 aa11.37□□□□□ -0.59
LRRK1-202ENST00000525284 TMEM256Q8N2U0 113 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms