RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 LINC01545Q5VT33 79 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 RFLNAQ6ZTI6 216 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 C9orf139Q6ZV77 190 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 SH2D6Q7Z4S9 175 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 GTSCR1Q86UQ5 136 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 TEN1Q86WV5 123 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 TMEM52Q8NDY8 209 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 OR8B3Q8NGG8 313 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 STAG3L4Q8TBR4 150 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 GTSF1Q8WW33 167 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 SPRY4Q9C004 299 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 TNFRSF19Q9NS68 423 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 C19orf25Q9UFG5 118 aaPredicted RBP5.24□□□□□ -1.57
SDC2-208ENST00000523877 RNF114Q9Y508 228 aa5.24□□□□□ -1.57
SDC2-208ENST00000523877 TMEM272A0A1B0GTI8 110 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 MED19A0JLT2 244 aaPredicted RBP5.23□□□□□ -1.57
SDC2-208ENST00000523877 LINC01553A4QN01 128 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 RBAKDNA6NC62 111 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 ZFP92A6NM28 416 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 J3QT63 122 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 FXYD1O00168 92 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 GPR137BO60478 399 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 ATP1B1P05026 303 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 C3orf79P0CE67 100 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 NPC2P61916 151 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 RPS11P62280 158 aaKnown RBP eCLIP5.23□□□□□ -1.57
SDC2-208ENST00000523877 SSBP1Q04837 148 aaKnown RBP5.23□□□□□ -1.57
SDC2-208ENST00000523877 CDK5R1Q15078 307 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 ELOCQ15369 112 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 MLANAQ16655 118 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 STPG1Q5TH74 334 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 LINC00305Q7Z4B0 112 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 LINC00311Q8N616 119 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 C15orf53Q8NAA6 179 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 OR2A1Q8NGT9 310 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 METTL26Q96S19 204 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 TMEM204Q9BSN7 226 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 MRPL18Q9H0U6 180 aaKnown RBP5.23□□□□□ -1.57
SDC2-208ENST00000523877 SDF2L1Q9HCN8 221 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 SCRT2Q9NQ03 307 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 FAM30AQ9NZY2 134 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 RBM12B-AS1Q9P1G2 102 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 PRO0461Q9UI25 63 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 ARFGEF2Q9Y6D5 1785 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 TMEM131Q92545 1883 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 ITGB4P16144 1822 aa5.23□□□□□ -1.57
SDC2-208ENST00000523877 COL6A3P12111 3177 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 C8orf87E5RJ46 101 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 E9PLD3 99 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 C11orf98E9PRG8 122 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 PRRG2O14669 202 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 PAX4O43316 350 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 ZNF324O75467 553 aaPredicted RBP5.22□□□□□ -1.57
SDC2-208ENST00000523877 APOHP02749 345 aaPredicted RBP5.22□□□□□ -1.57
SDC2-208ENST00000523877 GYPBP06028 91 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 COX8AP10176 69 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 HLA-DRB4P13762 266 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 GATA2P23769 480 aaPredicted RBP5.22□□□□□ -1.57
SDC2-208ENST00000523877 MPV17P39210 176 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 PTGDSP41222 190 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 DAPP51397 102 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 UBE2G1P62253 170 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 SP6Q3SY56 376 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 SLC25A30Q5SVS4 291 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 AMN1Q8IY45 258 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 BCL6BQ8N143 479 aaPredicted RBP5.22□□□□□ -1.57
SDC2-208ENST00000523877 RNF182Q8N6D2 247 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 FGFBP3Q8TAT2 258 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 MYOZ3Q8TDC0 251 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 PAXXQ9BUH6 204 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 ZNF256Q9Y2P7 627 aaPredicted RBP5.22□□□□□ -1.57
SDC2-208ENST00000523877 CSAG2Q9Y5P2 127 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 HLA-DRB4X5D2U9 266 aa5.22□□□□□ -1.57
SDC2-208ENST00000523877 FAM208AQ9UK61 1670 aaKnown RBP5.21□□□□□ -1.57
SDC2-208ENST00000523877 ZNF646O15015 1829 aaPredicted RBP5.21□□□□□ -1.58
SDC2-208ENST00000523877 IGLV3-22A0A075B6J6 115 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 ZNF736B4DX44 427 aaPredicted RBP5.21□□□□□ -1.58
SDC2-208ENST00000523877 F6UB75 175 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 F8W735 103 aaPredicted RBP5.21□□□□□ -1.58
SDC2-208ENST00000523877 LINC01619G3V211 115 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 H3BT86 120 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 ATOX1O00244 68 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 NDUFS5O43920 106 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 PDCD6O75340 191 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 NDUFB2O95178 105 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 EPPINO95925 133 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 PRH1P02810 166 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 COX6A1P12074 109 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 FSTP19883 344 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 MRPS36P82909 103 aaKnown RBP5.21□□□□□ -1.58
SDC2-208ENST00000523877 PAX8Q06710 450 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 CST6Q15828 149 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 LGALS9BQ3B8N2 356 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 C1orf140Q5VVS0 124 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 ZNF324BQ6AW86 544 aaPredicted RBP5.21□□□□□ -1.58
SDC2-208ENST00000523877 SLC22A24Q8N4F4 322 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 OR10G2Q8NGC3 310 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 FGF11Q92914 225 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 TMEM230Q96A57 120 aa5.21□□□□□ -1.58
SDC2-208ENST00000523877 ZC2HC1AQ96GY0 325 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms