RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 RND3P61587 244 aa10.93□□□□□ -0.66
TRAPPC9-213ENST00000522504 C16orf54Q6UWD8 224 aa10.93□□□□□ -0.66
TRAPPC9-213ENST00000522504 Q6ZRM9 215 aa10.93□□□□□ -0.66
TRAPPC9-213ENST00000522504 GLMPQ8WWB7 406 aa10.93□□□□□ -0.66
TRAPPC9-213ENST00000522504 NDUFAF3Q9BU61 184 aa10.93□□□□□ -0.66
TRAPPC9-213ENST00000522504 CCDC59Q9P031 241 aaKnown RBP10.93□□□□□ -0.66
TRAPPC9-213ENST00000522504 HELTA6NFD8 242 aa10.92□□□□□ -0.66
TRAPPC9-213ENST00000522504 CORTO00230 105 aa10.92□□□□□ -0.66
TRAPPC9-213ENST00000522504 HOXA1P49639 335 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-213ENST00000522504 PIGPP57054 158 aa10.92□□□□□ -0.66
TRAPPC9-213ENST00000522504 SP6Q3SY56 376 aa10.92□□□□□ -0.66
TRAPPC9-213ENST00000522504 CENPSQ8N2Z9 138 aa10.92□□□□□ -0.66
TRAPPC9-213ENST00000522504 SCPEP1Q9HB40 452 aa10.92□□□□□ -0.66
TRAPPC9-213ENST00000522504 IGLV2-18A0A075B6J9 118 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 FAM90A26D6RGX4 464 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 H3BMM0 161 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 IGLC1P0CG04 106 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 PGAM2P15259 253 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 RCVRNP35243 200 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 AKR1C2P52895 323 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 SUB1P53999 127 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 DEFB1P60022 68 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 Q6ZR54 194 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 LHFPL1Q86WI0 220 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 ZNF575Q86XF7 245 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 AP3S1Q92572 193 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 COMMD3Q9UBI1 195 aa10.91□□□□□ -0.66
TRAPPC9-213ENST00000522504 DNAH5Q8TE73 4624 aa10.9□□□□□ -0.66
TRAPPC9-213ENST00000522504 CD74P04233 296 aa10.9□□□□□ -0.66
TRAPPC9-213ENST00000522504 USF2Q15853 346 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-213ENST00000522504 CNPY1Q3B7I2 92 aa10.9□□□□□ -0.66
TRAPPC9-213ENST00000522504 RNASE12Q5GAN4 147 aaKnown RBP10.9□□□□□ -0.66
TRAPPC9-213ENST00000522504 PRSS54Q6PEW0 395 aa10.9□□□□□ -0.66
TRAPPC9-213ENST00000522504 ZNF705AQ6ZN79 300 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-213ENST00000522504 TMEM170AQ8WVE7 144 aa10.9□□□□□ -0.66
TRAPPC9-213ENST00000522504 NARS2Q96I59 477 aaKnown RBP10.9□□□□□ -0.66
TRAPPC9-213ENST00000522504 C3orf85A0A1B0GTC6 90 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 NXPH3O95157 252 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 APOA1P02647 267 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 HNRNPCP07910 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 ELK1P19419 428 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 RND2P52198 227 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 EMP1P54849 157 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 DHODHQ02127 395 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 GDF5OSQ5U4N7 250 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 MZT2AQ6P582 158 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 MCFD2Q8NI22 146 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 ZNF486Q96H40 463 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 PDCD10Q9BUL8 212 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 SLIRPQ9GZT3 109 aaKnown RBP10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 PLA2G2EQ9NZK7 142 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 KLK11Q9UBX7 282 aa10.89□□□□□ -0.67
TRAPPC9-213ENST00000522504 ZNF705FA8MVS1 300 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 ZNF705DP0CH99 300 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 ZNF705BP0CI00 300 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 OR10J1P30954 320 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 FXYD7P58549 80 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 TRIM16LQ309B1 348 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 AARDQ4LEZ3 155 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 GSG1LQ6UXU4 331 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 OR4D10Q8NGI6 311 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 OR1S2Q8NGQ3 325 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 C1QTNF4Q9BXJ3 329 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 ENY2Q9NPA8 101 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 HERC1Q15751 4861 aa10.88□□□□□ -0.67
TRAPPC9-213ENST00000522504 TRAV30A0A087WSZ9 112 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 RGS5O15539 181 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 BUB3O43684 328 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 HPGDSO60760 199 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 IFNA10P01566 189 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 CD3DP04234 171 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 IL4P05112 153 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 HLA-DRB4P13762 266 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 UCP1P25874 307 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 NPY1RP25929 384 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 EIF2B2P49770 351 aaKnown RBP10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 YPEL3P61236 119 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 LHFPL5Q8TAF8 219 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 Q8WTZ3 238 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 NEU1Q99519 415 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 NRN1Q9NPD7 142 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 HLA-DRB4X5D2U9 266 aa10.87□□□□□ -0.67
TRAPPC9-213ENST00000522504 IGKV3-20P01619 116 aa10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 SPART-AS1P0CW21 52 aa10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 HTR2BP41595 481 aa10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 AP2S1P53680 142 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 SPCS3P61009 180 aa10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 NUTF2P61970 127 aaKnown RBP10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 SNRPD3P62318 126 aaKnown RBP10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 SIGLEC15Q6ZMC9 328 aa10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 OR13C8Q8NGS7 320 aa10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 RRNAD1Q96FB5 475 aaKnown RBP10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 PTTG2Q9NZH5 202 aa10.86□□□□□ -0.67
TRAPPC9-213ENST00000522504 IGHV3OR16-12A0A075B7B8 117 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 RPS10-NUDT3A0A1W2PQS6 291 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 FAM25AB3EWG3 89 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 FAM25CB3EWG5 89 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 FAM25GB3EWG6 89 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 CTDSP2O14595 271 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms