RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MYH2Q9UKX2 1941 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 CACNA1GO43497 2377 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 CAMSAP1Q5T5Y3 1602 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 RIMS1Q86UR5 1692 aaKnown RBP2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 SPEF2Q9C093 1822 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 KIF13BQ9NQT8 1826 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 IFNA21P01568 189 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 APOC1P02654 83 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 PMP2P02689 132 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 SMIM17P0DL12 118 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 AKR1C3P42330 323 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 RPL19P84098 196 aaKnown RBP2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 WHAMMP3Q1A5X7 153 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 DEFB115Q30KQ5 88 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 ARHGAP11BQ3KRB8 267 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 LINC01554Q52M75 96 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 LCN15Q6UWW0 184 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 DPPA3Q6W0C5 159 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 GOLT1AQ6ZVE7 132 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 LCA10Q71F78 164 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 AAED1Q7RTV5 226 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 COA5Q86WW8 74 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 ZNF439Q8NDP4 499 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 OR10J5Q8NHC4 309 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 MBD3L1Q8WWY6 194 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 YIPF3Q9GZM5 350 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 PCBD2Q9H0N5 130 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 MIXL1Q9H2W2 232 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 SMPXQ9UHP9 88 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 NUBP2Q9Y5Y2 271 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 MALRD1Q5VYJ5 2156 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 HECW1Q76N89 1606 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 MPDZO75970 2070 aa2.13□□□□□ -2.07
HMGB1P46-201ENST00000520062 DOCK5Q9H7D0 1870 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 RIC1Q4ADV7 1423 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 CST8O60676 142 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 NBEAP1P0C6P0 100 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 SCGB1A1P11684 91 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 ELOBQ15370 118 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 IDO2Q6ZQW0 420 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 C3orf62Q6ZUJ4 267 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 LYG2Q86SG7 212 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 SIGLECL1Q8N7X8 197 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 WFDC11Q8NEX6 87 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 TSC22D3Q99576 134 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 AIF1LQ9BQI0 150 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 BOLA2Q9H3K6 86 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 NCKAP5O14513 1909 aa2.12□□□□□ -2.07
HMGB1P46-201ENST00000520062 TRBV19A0A075B6N1 114 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 TRAV4A0A0B4J268 109 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 TRAPPC13A5PLN9 417 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 TSTD3H0UI37 97 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 CRHP06850 196 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 Q1T7F1 81 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 LYRM7Q5U5X0 104 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 OSTCQ9NRP0 149 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 CPAMD8Q8IZJ3 1885 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 BAHCC1Q9P281 2608 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 CEP152O94986 1710 aa2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 COL5A3P25940 1745 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P46-201ENST00000520062 TONSLQ96HA7 1378 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 C1QBP02746 253 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 GPX2P18283 190 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 NNATQ16517 81 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 KHDC3LQ587J8 217 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 Q6ZQT0 140 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 ZNF826PQ6ZT77 177 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 STX19Q8N4C7 294 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 OR52R1Q8NGF1 315 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 OR4D11Q8NGI4 311 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 OR5A1Q8NGJ0 315 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 ZHX1-C8orf76Q96EF9 292 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 OR52A1Q9UKL2 312 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 PYCARDQ9ULZ3 195 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 HSPB11Q9Y547 144 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 GREB1Q4ZG55 1949 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 DOCK3Q8IZD9 2030 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 CCNB3Q8WWL7 1395 aa2.1□□□□□ -2.07
HMGB1P46-201ENST00000520062 FMN1Q68DA7 1419 aa2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 A0A087X0T9 212 aa2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 ZNF705BP0CI00 300 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 COX4I1P13073 169 aa2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 RHEBQ15382 184 aa2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 OR4E2Q8NGC2 313 aa2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 ZNF625Q96I27 306 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 TMEM133Q9H2Q1 129 aa2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 EPDR1Q9UM22 224 aa2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 NDUFAF1Q9Y375 327 aa2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 AMMECR1Q9Y4X0 333 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P46-201ENST00000520062 CITO14578 2027 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 TRGV2A0A075B6R0 118 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 KPNA4O00629 521 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 SULT1C4O75897 302 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 CTSDP07339 412 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 S100PP25815 95 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 CRYBA4P53673 196 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 PIGPP57054 158 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 TSNQ15631 228 aaKnown RBP2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 IMUPQ9GZP8 106 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms