RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 AP4M1O00189 453 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 HMGB3O15347 200 aaKnown RBP5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 HOXA3O43365 443 aaPredicted RBP5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 COX7A2P2O60397 106 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 CLN5O75503 358 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SCGB2A1O75556 95 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 EIF3GO75821 320 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 NDUFB8O95169 186 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IFNA1P01562 189 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGF1P05019 195 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGLC1P0CG04 106 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 NPBWR1P48145 328 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FGF8P55075 233 aaPredicted RBP5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 BLCAPP62952 87 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ZNF90Q03938 601 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PEA15Q15121 130 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 KLK9Q2XQG4 91 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 C19orf54Q5BKX5 351 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TOR2AQ5JU69 321 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FAM78BQ5VT40 261 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IL17RELQ6ZVW7 336 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IQCF2Q8IXL9 164 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 OR1L4Q8NGR5 311 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 VN1R17PQ8TDU5 208 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 GATAD1Q8WUU5 269 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PFDN5Q99471 154 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 RNF2Q99496 336 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 EIF5A2Q9GZV4 153 aaKnown RBP5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TMEM231Q9H6L2 316 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 C21orf62Q9NYP8 219 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FBXL7Q9UJT9 491 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 KLK9Q9UKQ9 250 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MXRA5Q9NR99 2828 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ZFHX3Q15911 3703 aa5.99□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TRBV9A0A0B4J1U6 114 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 RBFOX3A6NFN3 312 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 GNG7O60262 68 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 CD5P06127 495 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 STAG3L2P0CL84 134 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 STAG3L3P0CL85 134 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ZP3P21754 424 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 RHOGP84095 191 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SRSF3P84103 164 aaKnown RBP5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SCGB2A2Q13296 93 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 HAGHQ16775 308 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TIGITQ495A1 244 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 Q56UQ5 140 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 C10orf113Q5VZT2 155 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 RBMS3Q6XE24 437 aaKnown RBP5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SIGLECL1Q8N7X8 197 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 NECAP1Q8NC96 275 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TXN2Q99757 166 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SCRT1Q9BWW7 348 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MRPL32Q9BYC8 188 aaKnown RBP5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SMDT1Q9H4I9 107 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 GSX1Q9H4S2 264 aaPredicted RBP5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 GNG13Q9P2W3 67 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 LINC00527Q9UJ94 153 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FUT9Q9Y231 359 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 S4R3C0 116 aa5.98□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ELOA3CA0A087WX78 387 aaPredicted RBP5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 LOC102723971A0A1B0GUV8 181 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TMEM218A2RU14 115 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PSMB11A5LHX3 300 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FAM223BA6NKX1 122 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 H3BUA1 57 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 HYPMO75409 117 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 CXorf1O96002 111 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 IGKV1-17P01599 117 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TRGV3P03979 118 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 OR5G3P0C626 314 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 RD3LP0DJH9 198 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ARL14EPLP0DKL9 152 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PSG1P11464 419 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ORM2P19652 201 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FCGR2BP31994 310 aaPredicted RBP5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PSMB3P49720 205 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PPT1P50897 306 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TAS2R45P59539 299 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 DEFA5Q01523 94 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ATP5G2Q06055 141 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PMS2P11Q13670 270 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 C15orf32Q32M92 178 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 KHDC3LQ587J8 217 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 ZNF506Q5JVG8 444 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SPATA31B1PQ5VZV4 182 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 Q6ZS46 218 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MIR17HGQ75NE6 70 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 FAM223AQ8IWN6 122 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TMEM86BQ8N661 226 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 TMEM37Q8WXS4 190 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 EEF1AKMT3Q96AZ1 226 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 NOL4LQ96MY1 436 aaPredicted RBP5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 LINC00052Q96N35 136 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 MS4A10Q96PG2 267 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 RARRES2Q99969 163 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 PRSS22Q9GZN4 317 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 NPFFR1Q9GZQ6 430 aa5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 SEPSECSQ9HD40 501 aaKnown RBP5.97□□□□□ -1.45
SCARNA20.1-201ENST00000516009 DNAJC4Q9NNZ3 241 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms