RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 CDH23Q9H251 3354 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 YLPM1P49750 1951 aaKnown RBP11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 SAA2-SAA4A0A096LPE2 208 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 SAA2P0DJI9 122 aaPredicted RBP11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 IGLL1P15814 213 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 VMA21Q3ZAQ7 101 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 LINC00305Q7Z4B0 112 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 PRSS33Q8NF86 280 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 NUDT10Q8NFP7 164 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 NUDT11Q96G61 164 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 ZNF430Q9H8G1 570 aaPredicted RBP11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 HILPDAQ9Y5L2 63 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 PRRC2CQ9Y520 2896 aaKnown RBP11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 A0A087X0K7 114 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 MUC21A0A140T8X8 626 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 A6NDN8 102 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 DKK1O94907 266 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 MUC21Q5SSG8 566 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 C9orf106Q8NAJ2 232 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 IFI27L2Q9H2X8 130 aa11.19□□□□□ -0.62
SH3TC1-225ENST00000515682 A0A1W2PN81 502 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 IQCF6A8MYZ5 107 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 IGHV1-2P23083 117 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 FAM27E3Q08E93 113 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 FNDC4Q9H6D8 234 aaPredicted RBP11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 ZGRF1Q86YA3 2104 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 CORTO00230 105 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 PLCE1Q9P212 2302 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 IGHV1-69-2A0A0G2JMI3 117 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 CHODLQ9H9P2 273 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 PEF1Q9UBV8 284 aaKnown RBP11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 CECR9P0C854 216 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 SRSF12Q8WXF0 261 aaKnown RBP11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 SPRR3Q9UBC9 169 aa11.18□□□□□ -0.62
SH3TC1-225ENST00000515682 A0A1W2PRE2 83 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 LIPFP07098 398 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 TMEM116Q8NCL8 245 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 IGF2RP11717 2491 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 ARFGEF3Q5TH69 2177 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 PMS2P5A8MQ11 134 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 MEGF9Q9H1U4 602 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 AP5S1Q9NUS5 200 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 SLC25A10Q9UBX3 287 aaPredicted RBP11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 NOTCH2Q04721 2471 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 SLC25A17O43808 307 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 COL8A2P25067 703 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 OR52E5Q8NH55 327 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 RAB1BQ9H0U4 201 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 RNF7Q9UBF6 113 aa11.17□□□□□ -0.62
SH3TC1-225ENST00000515682 GGTLC3B5MD39 225 aa11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 RIGQ13278 110 aa11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 PNKDQ8N490 385 aa11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 CD177Q8N6Q3 437 aa11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 FAM222BQ8WU58 562 aa11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 PLP1P60201 277 aa11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 GOLT1AQ6ZVE7 132 aa11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 STXBP6Q8NFX7 210 aa11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 FAM168AQ92567 244 aa11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 MRPS16Q9Y3D3 137 aaKnown RBP11.16□□□□□ -0.62
SH3TC1-225ENST00000515682 H3BUT2 72 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 PRSS1P07477 247 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 NBEAP1P0C6P0 100 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 TCF15Q12870 199 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 C10orf55Q5SWW7 151 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 WFDC3Q8IUB2 231 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 MRPL32Q9BYC8 188 aaKnown RBP11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 APOHP02749 345 aaPredicted RBP11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 DAZAP2Q15038 168 aaPredicted RBP11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 FAM57AQ8TBR7 257 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 TP53TG3Q9ULZ0 132 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 LY96Q9Y6Y9 160 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 C7orf71A4D174 169 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 GPR183P32249 361 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 FAM216BQ8N7L0 139 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 MDS2Q8NDY4 140 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 VSTM2AQ8TAG5 236 aa11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 RPP21Q9H633 154 aaKnown RBP11.15□□□□□ -0.62
SH3TC1-225ENST00000515682 YPEL1O60688 119 aa11.15□□□□□ -0.63
SH3TC1-225ENST00000515682 SAA1P0DJI8 122 aaPredicted RBP11.15□□□□□ -0.63
SH3TC1-225ENST00000515682 GCSHP23434 173 aa11.15□□□□□ -0.63
SH3TC1-225ENST00000515682 NBL1P41271 181 aa11.15□□□□□ -0.63
SH3TC1-225ENST00000515682 C5orf30Q96GV9 206 aa11.15□□□□□ -0.63
SH3TC1-225ENST00000515682 YPEL2Q96QA6 119 aa11.15□□□□□ -0.63
SH3TC1-225ENST00000515682 PTPRSQ13332 1948 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 PIP4P1Q86T03 277 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 GCSAMQ8N6F7 178 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 OR4F17Q8NGA8 305 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 IDI2-AS1Q9NZ38 188 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 PIEZO2Q9H5I5 2752 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.14□□□□□ -0.631e-6■■■□□ 18.8
SH3TC1-225ENST00000515682 ATRXP46100 2492 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 TRAV30A0A087WSZ9 112 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 IGHV2OR16-5A0A0B4J2B6 119 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 SLC25A33Q9BSK2 321 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms