RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 ARL2-SNX15V9GYD0 113 aa7.47□□□□□ -1.21
TPM3-222ENST00000515609 MED13LQ71F56 2210 aa7.47□□□□□ -1.21
TPM3-222ENST00000515609 CREBBPQ92793 2442 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 ABCA2Q9BZC7 2435 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 TRBV9A0A0B4J1U6 114 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 RBFOX3A6NFN3 312 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 K7EIM0 57 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 HYPMO75409 117 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 AMY1AP04745 511 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 FHITP49789 147 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 RAB9AP51151 201 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 MFAP2P55001 183 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 PLP1P60201 277 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 RHOGP84095 191 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 NDPQ00604 133 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 RELQ04864 619 aaPredicted RBP7.46□□□□□ -1.22
TPM3-222ENST00000515609 GUK1Q16774 197 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 ASPHD1Q5U4P2 390 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 FAM78BQ5VT40 261 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 LCN15Q6UWW0 184 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 CIARTQ8N365 385 aaPredicted RBP7.46□□□□□ -1.22
TPM3-222ENST00000515609 OR51G1Q8NGK1 321 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 FANCD2OSQ96PS1 177 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 NKX6-2Q9C056 277 aaPredicted RBP7.46□□□□□ -1.22
TPM3-222ENST00000515609 VAX2Q9UIW0 290 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 FUT9Q9Y231 359 aa7.46□□□□□ -1.22
TPM3-222ENST00000515609 UTP20O75691 2785 aaKnown RBP7.46□□□□□ -1.22
TPM3-222ENST00000515609 CR1P17927 2039 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 ABCA12Q86UK0 2595 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 IGKV1OR2-108A0A075B7D4 117 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 CLDN34H7C241 214 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 HMGB3O15347 200 aaKnown RBP7.45□□□□□ -1.22
TPM3-222ENST00000515609 HOXA3O43365 443 aaPredicted RBP7.45□□□□□ -1.22
TPM3-222ENST00000515609 OR2J3O76001 311 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 TOMM40O96008 361 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 HSPB1P04792 205 aaKnown RBP7.45□□□□□ -1.22
TPM3-222ENST00000515609 CRYBA1P05813 215 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 OR5G3P0C626 314 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 IGLC1P0CG04 106 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 C8orf88P0DMB2 117 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 ZP3P21754 424 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 MLANAQ16655 118 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 C15orf32Q32M92 178 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 IQCF2Q8IXL9 164 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 BCL6BQ8N143 479 aaPredicted RBP7.45□□□□□ -1.22
TPM3-222ENST00000515609 SLC35B3Q9H1N7 401 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 SLC25A22Q9H936 323 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 PLA2G2EQ9NZK7 142 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 GNG13Q9P2W3 67 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 HIGD1AQ9Y241 93 aa7.45□□□□□ -1.22
TPM3-222ENST00000515609 CRYBG3Q68DQ2 2970 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 APCP25054 2843 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 TACC2O95359 2948 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 TMEM218A2RU14 115 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 BMPR1BO00238 502 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 PDE6DO43924 150 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 YIF1AO95070 293 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 NDUFB8O95169 186 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 TRGV3P03979 118 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 CD5P06127 495 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 STAG3L2P0CL84 134 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 BCL2P10415 239 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 SRD5A1P18405 259 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 TOR2AQ5JU69 321 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 ZNF506Q5JVG8 444 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 TEX38Q6PEX7 206 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 ZNF600Q6ZNG1 722 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 SIGLECL1Q8N7X8 197 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 TCEAL7Q9BRU2 100 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 SEC11CQ9BY50 192 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 VSIRQ9H7M9 311 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 CENPEQ02224 2701 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 FBN2P35556 2912 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 CELSR2Q9HCU4 2923 aa7.44□□□□□ -1.22
TPM3-222ENST00000515609 MDFIC2A0A1B0GVS7 189 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 TMEM250H0YL14 139 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 OR7C2O60412 319 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 OR2C1O95371 312 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 IGHG4P01861 327 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 ELANEP08246 267 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 PF4V1P10720 104 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 PSG1P11464 419 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 ORM2P19652 201 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 TPPP2P59282 170 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 ZNF90Q03938 601 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 FAM74A3Q4VXF1 159 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 FBLN7Q53RD9 439 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 C19orf54Q5BKX5 351 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 SVBPQ8N300 66 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 OR1B1Q8NGR6 318 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 ZNF502Q8TBZ5 544 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 UHRF2Q96PU4 802 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 DMRT1Q9Y5R6 373 aa7.43□□□□□ -1.22
TPM3-222ENST00000515609 POLQO75417 2590 aa7.42□□□□□ -1.22
TPM3-222ENST00000515609 IGKV1D-37A0A075B6S9 117 aa7.42□□□□□ -1.22
TPM3-222ENST00000515609 F6UZH7 168 aa7.42□□□□□ -1.22
TPM3-222ENST00000515609 F8W036 122 aa7.42□□□□□ -1.22
TPM3-222ENST00000515609 G3V318 75 aa7.42□□□□□ -1.22
TPM3-222ENST00000515609 IGKV1-17P01599 117 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms