RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 PRR13Q9NZ81 148 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 IGKV3-7A0A075B6H7 116 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 IGHV3-49A0A0A0MS15 119 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 F8W735 103 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-215ENST00000514660 FCGR3BO75015 233 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 DHFRP00374 187 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 IGKV1-39P01597 117 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 IGKV1D-39P04432 117 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 MIFP14174 115 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 UCP1P25874 307 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 S100GP29377 79 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 FUSP35637 526 aaKnown RBP eCLIP7.48□□□□□ -1.21
NEDD9-215ENST00000514660 LPAR6P43657 344 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 OR2B11Q5JQS5 317 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 FAM90A2PQ658T7 463 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 SPAG16Q8N0X2 631 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 LYPD1Q8N2G4 141 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 CSNK1G2-AS1Q8NCQ2 148 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 LHFPL5Q8TAF8 219 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 TMEM222Q9H0R3 208 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 CLEC5AQ9NY25 188 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 MDFICQ9P1T7 246 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 KCNIP3Q9Y2W7 256 aa7.48□□□□□ -1.21
NEDD9-215ENST00000514660 C7orf66A4D0T2 115 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 PRAF2O60831 178 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 CDS2O95674 445 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 IFNA21P01568 189 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 IFNA17P01571 189 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 VAMP1P23763 118 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 CATR1Q13166 79 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 C4orf46Q504U0 113 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 LAMTOR1Q6IAA8 161 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 SELENOHQ8IZQ5 122 aaKnown RBP7.47□□□□□ -1.21
NEDD9-215ENST00000514660 GBGT1Q8N5D6 347 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 ZNF431Q8TF32 576 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-215ENST00000514660 TMEM56Q96MV1 263 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 DAZ1Q9NQZ3 744 aaKnown RBP7.47□□□□□ -1.21
NEDD9-215ENST00000514660 FAM212BQ9NTI7 297 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-215ENST00000514660 SMPXQ9UHP9 88 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 PRELID3BQ9Y3B1 194 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 ALG5Q9Y673 324 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 TMEM56-RWDD3S4R434 201 aa7.47□□□□□ -1.21
NEDD9-215ENST00000514660 TRBV7-1A0A0A6YYK4 115 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 A0A0B4J2A0 478 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 A0A1B0GVG6 124 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 SNRPGP15A8MWD9 76 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 CHEK1O14757 476 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 RBFOX2O43251 390 aaKnown RBP eCLIP7.46□□□□□ -1.22
NEDD9-215ENST00000514660 TGOLN2O43493 480 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 B3GALNT1O75752 331 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 HPRT1P00492 218 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 RRASP10301 218 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 DEFB131AP59861 70 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 RNF212Q495C1 297 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 MMD2Q8IY49 270 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 C6orf223Q8N319 242 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 LILRB2Q8N423 598 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 C12orf45Q8N5I9 185 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-215ENST00000514660 LRTM2Q8N967 370 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 MITD1Q8WV92 249 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 C20orf24Q9BUV8 137 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 SHPKQ9UHJ6 478 aa7.46□□□□□ -1.22
NEDD9-215ENST00000514660 IGHV3OR16-13A0A075B7E8 117 aa7.45□□□□□ -1.22
NEDD9-215ENST00000514660 IGHV3-74A0A0B4J1X5 117 aa7.45□□□□□ -1.22
NEDD9-215ENST00000514660 DBX1A6NMT0 343 aa7.45□□□□□ -1.22
NEDD9-215ENST00000514660 IGKV1-5P01602 117 aa7.45□□□□□ -1.22
NEDD9-215ENST00000514660 RPL27AP46776 148 aaKnown RBP7.45□□□□□ -1.22
NEDD9-215ENST00000514660 RTL8BQ17RB0 113 aa7.45□□□□□ -1.22
NEDD9-215ENST00000514660 LYZL2Q7Z4W2 148 aa7.45□□□□□ -1.22
NEDD9-215ENST00000514660 TRPT1Q86TN4 253 aaKnown RBP7.45□□□□□ -1.22
NEDD9-215ENST00000514660 SEC22AQ96IW7 307 aa7.45□□□□□ -1.22
NEDD9-215ENST00000514660 PLEKHA2Q9HB19 425 aa7.45□□□□□ -1.22
NEDD9-215ENST00000514660 GPN1Q9HCN4 374 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-215ENST00000514660 A0A0G2JRQ6 117 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 NBDYA0A0U1RRE5 68 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 OR2T8A6NH00 312 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 K7EMT4 169 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 ACTL6BO94805 426 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 KRASP01116 189 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 SERPINE2P07093 398 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 P0C879 139 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 ANXA3P12429 323 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 G6PCP35575 357 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 CBX3Q13185 183 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 POU2AF1Q16633 256 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 TMEM268Q5VZI3 342 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 PUSL1Q8N0Z8 303 aaKnown RBP7.44□□□□□ -1.22
NEDD9-215ENST00000514660 LGI3Q8N145 548 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 OR4S2Q8NH73 311 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 OSR1Q8TAX0 266 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-215ENST00000514660 RBPMSQ93062 196 aaKnown RBP7.44□□□□□ -1.22
NEDD9-215ENST00000514660 IL22RA2Q969J5 263 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 GPR146Q96CH1 333 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 RHPN1-AS1Q9BWJ2 59 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 KRTAP1-5Q9BYS1 174 aa7.44□□□□□ -1.22
NEDD9-215ENST00000514660 IGHV3-21A0A0B4J1V1 117 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 TRAV3A0A0B4J244 114 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 IGLC7A0M8Q6 106 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 KNCNA6PVL3 124 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 CREBL2O60519 120 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms