RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PSENENQ9NZ42 101 aa10.54□□□□□ -0.72
USP46-209ENST00000514536 LSM4Q9Y4Z0 139 aaKnown RBP10.54□□□□□ -0.72
USP46-209ENST00000514536 PUS1Q9Y606 427 aaKnown RBP eCLIP10.54□□□□□ -0.72
USP46-209ENST00000514536 ZNF785A8K8V0 405 aa10.53□□□□□ -0.72
USP46-209ENST00000514536 H3BP45 60 aa10.53□□□□□ -0.72
USP46-209ENST00000514536 PRAF2O60831 178 aa10.53□□□□□ -0.72
USP46-209ENST00000514536 SCGB2A1O75556 95 aa10.53□□□□□ -0.72
USP46-209ENST00000514536 MBPP02686 304 aaPredicted RBP10.53□□□□□ -0.72
USP46-209ENST00000514536 OR10J1P30954 320 aa10.53□□□□□ -0.72
USP46-209ENST00000514536 SMIM8Q96KF7 97 aa10.53□□□□□ -0.72
USP46-209ENST00000514536 C2orf50Q96LR7 162 aa10.53□□□□□ -0.72
USP46-209ENST00000514536 STRAPQ9Y3F4 350 aaKnown RBP10.53□□□□□ -0.72
USP46-209ENST00000514536 SORL1Q92673 2214 aa10.53□□□□□ -0.72
USP46-209ENST00000514536 TRAV14DV4A0A0A6YYC5 116 aa10.52□□□□□ -0.72
USP46-209ENST00000514536 SNRPGP15A8MWD9 76 aa10.52□□□□□ -0.72
USP46-209ENST00000514536 IGLC1P0CG04 106 aa10.52□□□□□ -0.72
USP46-209ENST00000514536 PAX9P55771 341 aa10.52□□□□□ -0.72
USP46-209ENST00000514536 GAMTQ14353 236 aa10.52□□□□□ -0.72
USP46-209ENST00000514536 GUCA2BQ16661 112 aa10.52□□□□□ -0.72
USP46-209ENST00000514536 GSG1LQ6UXU4 331 aa10.52□□□□□ -0.72
USP46-209ENST00000514536 OR1S2Q8NGQ3 325 aa10.52□□□□□ -0.72
USP46-209ENST00000514536 WDR89Q96FK6 387 aaPredicted RBP10.52□□□□□ -0.72
USP46-209ENST00000514536 SMPXQ9UHP9 88 aa10.52□□□□□ -0.72
USP46-209ENST00000514536 DNAH3Q8TD57 4116 aa10.52□□□□□ -0.73
USP46-209ENST00000514536 IGHV3-49A0A0A0MS15 119 aa10.52□□□□□ -0.73
USP46-209ENST00000514536 DCTN2Q13561 401 aaKnown RBP10.52□□□□□ -0.73
USP46-209ENST00000514536 TMEM61Q8N0U2 210 aa10.52□□□□□ -0.73
USP46-209ENST00000514536 SLC35E1Q96K37 410 aa10.52□□□□□ -0.73
USP46-209ENST00000514536 RAB40CQ96S21 281 aa10.52□□□□□ -0.73
USP46-209ENST00000514536 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
USP46-209ENST00000514536 RCL1Q9Y2P8 373 aaKnown RBP10.52□□□□□ -0.73
USP46-209ENST00000514536 IGHV3OR16-13A0A075B7E8 117 aa10.51□□□□□ -0.73
USP46-209ENST00000514536 IGHV3-74A0A0B4J1X5 117 aa10.51□□□□□ -0.73
USP46-209ENST00000514536 IGHV7-4-1A0A0J9YVY3 117 aa10.51□□□□□ -0.73
USP46-209ENST00000514536 SCAF4O95104 1147 aaKnown RBP10.51□□□□□ -0.73
USP46-209ENST00000514536 SIX6O95475 246 aa10.51□□□□□ -0.73
USP46-209ENST00000514536 YPEL3P61236 119 aaPredicted RBP10.51□□□□□ -0.73
USP46-209ENST00000514536 Q8N1Y9 231 aa10.51□□□□□ -0.73
USP46-209ENST00000514536 Q8WTZ3 238 aa10.51□□□□□ -0.73
USP46-209ENST00000514536 GINS3Q9BRX5 216 aa10.51□□□□□ -0.73
USP46-209ENST00000514536 RHPN1-AS1Q9BWJ2 59 aa10.51□□□□□ -0.73
USP46-209ENST00000514536 LSM5Q9Y4Y9 91 aaKnown RBP10.51□□□□□ -0.73
USP46-209ENST00000514536 SMAD5-AS1Q9Y6J3 95 aa10.51□□□□□ -0.73
USP46-209ENST00000514536 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
USP46-209ENST00000514536 CHEK1O14757 476 aa10.5□□□□□ -0.73
USP46-209ENST00000514536 TAS2R30P59541 319 aa10.5□□□□□ -0.73
USP46-209ENST00000514536 RBPMS2Q6ZRY4 209 aaKnown RBP10.5□□□□□ -0.73
USP46-209ENST00000514536 TRAV25A0A0B4J276 109 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 C7orf66A4D0T2 115 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 ZFP92A6NM28 416 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 K7EPK0 472 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 L7N2F9 121 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 GOSR2O14653 212 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 APOHP02749 345 aaPredicted RBP10.49□□□□□ -0.73
USP46-209ENST00000514536 RD3LP0DJH9 198 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 VAMP2P63027 116 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 IL15RAQ13261 267 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 OR8G2PQ6IF36 304 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 GTSCR1Q86UQ5 136 aa10.49□□□□□ -0.73
USP46-209ENST00000514536 IGKV1D-37A0A075B6S9 117 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 IGHV3-66A0A0C4DH42 116 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 PMS2P5A8MQ11 134 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 SSNA1O43805 119 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 TSC22D2O75157 780 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 CCNKO75909 580 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 PTTG1O95997 202 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 TOMM40O96008 361 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 METTL15P1P0C7V9 234 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 NPPCP23582 126 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 RAB32Q13637 225 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 LAMTOR1Q6IAA8 161 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 TMEM14EPQ6UXP3 125 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 RNF2Q99496 336 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 CD7P09564 240 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 PSG1P11464 419 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 BCAP31P51572 246 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 CD81P60033 236 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 S100A10P60903 97 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 ZNF90Q03938 601 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 ACOT7LQ6ZUV0 252 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 LILRB2Q8N423 598 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 ST8SIA2Q92186 375 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 METTL26Q96S19 204 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 NEURL2Q9BR09 285 aa10.48□□□□□ -0.73
USP46-209ENST00000514536 IL4P05112 153 aa10.47□□□□□ -0.73
USP46-209ENST00000514536 CRYBB3P26998 211 aa10.47□□□□□ -0.73
USP46-209ENST00000514536 OR10P1Q8NGE3 313 aa10.47□□□□□ -0.73
USP46-209ENST00000514536 B9D2Q9BPU9 175 aa10.47□□□□□ -0.73
USP46-209ENST00000514536 VSIRQ9H7M9 311 aa10.47□□□□□ -0.73
USP46-209ENST00000514536 IGKV1OR2-108A0A075B7D4 117 aa10.46□□□□□ -0.74
USP46-209ENST00000514536 SMCO3A2RU48 225 aa10.46□□□□□ -0.74
USP46-209ENST00000514536 FAM24AA6NFZ4 105 aa10.46□□□□□ -0.74
USP46-209ENST00000514536 TSPAN4O14817 238 aa10.46□□□□□ -0.74
USP46-209ENST00000514536 IGHV4-30-4P0DP06 118 aa10.46□□□□□ -0.74
USP46-209ENST00000514536 PVALBP20472 110 aaPredicted RBP10.46□□□□□ -0.74
USP46-209ENST00000514536 BMI1P35226 326 aa10.46□□□□□ -0.74
USP46-209ENST00000514536 RRAS2P62070 204 aaPredicted RBP10.46□□□□□ -0.74
USP46-209ENST00000514536 AKR1C1Q04828 323 aa10.46□□□□□ -0.74
USP46-209ENST00000514536 OR2F1Q13607 317 aa10.46□□□□□ -0.74
USP46-209ENST00000514536 USF2Q15853 346 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms