RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 APOHP02749 345 aaPredicted RBP7.23□□□□□ -1.25
RNF4-221ENST00000513643 TCRBP04435 133 aa7.23□□□□□ -1.25
RNF4-221ENST00000513643 CRYBB3P26998 211 aa7.23□□□□□ -1.25
RNF4-221ENST00000513643 GPX4P36969 197 aaPredicted RBP7.23□□□□□ -1.25
RNF4-221ENST00000513643 INPP1P49441 399 aa7.23□□□□□ -1.25
RNF4-221ENST00000513643 GUCA2BQ16661 112 aa7.23□□□□□ -1.25
RNF4-221ENST00000513643 ETFRF1Q6IPR1 90 aa7.23□□□□□ -1.25
RNF4-221ENST00000513643 OR4D5Q8NGN0 318 aa7.23□□□□□ -1.25
RNF4-221ENST00000513643 OR1S1Q8NH92 325 aa7.23□□□□□ -1.25
RNF4-221ENST00000513643 WFDC10AQ9H1F0 79 aa7.23□□□□□ -1.25
RNF4-221ENST00000513643 PTTG2Q9NZH5 202 aa7.23□□□□□ -1.25
RNF4-221ENST00000513643 PLECQ15149 4684 aaKnown RBP7.23□□□□□ -1.25
RNF4-221ENST00000513643 IGKV1D-37A0A075B6S9 117 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 LINC00854A0A1B0GVQ3 168 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 SYNGR2O43760 224 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 IFNA10P01566 189 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 CD5P06127 495 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 HOXB5P09067 269 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 RND2P52198 227 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 IFITM3Q01628 133 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 ASAH1Q13510 395 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 GAMTQ14353 236 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 ODF3L2Q3SX64 289 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 TIGITQ495A1 244 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 LAMTOR1Q6IAA8 161 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 RBPMS2Q6ZRY4 209 aaKnown RBP7.22□□□□□ -1.25
RNF4-221ENST00000513643 SLC16A13Q7RTY0 426 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 OR1S2Q8NGQ3 325 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 S100ZQ8WXG8 99 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 NPIPB3Q92617 1050 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 RCHY1Q96PM5 261 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 GINS3Q9BRX5 216 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 DNAH1Q9P2D7 4330 aa7.22□□□□□ -1.25
RNF4-221ENST00000513643 TRAV2A0A0B4J234 112 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 PMS2P5A8MQ11 134 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 MED6O75586 246 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 YIF1AO95070 293 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 OR10J1P30954 320 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 PAX9P55771 341 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 OR52B4Q8NGK2 314 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 COQ8AQ8NI60 647 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 ST8SIA2Q92186 375 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 CIB3Q96Q77 187 aaPredicted RBP7.21□□□□□ -1.26
RNF4-221ENST00000513643 C20orf85Q9H1P6 137 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 TUBA4BQ9H853 241 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 SRD5A3Q9H8P0 318 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 EDA2RQ9HAV5 297 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 BATF3Q9NR55 127 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 RYR2Q92736 4967 aa7.21□□□□□ -1.26
RNF4-221ENST00000513643 IGKV1OR2-108A0A075B7D4 117 aa7.2□□□□□ -1.26
RNF4-221ENST00000513643 TOMM40O96008 361 aa7.2□□□□□ -1.26
RNF4-221ENST00000513643 NPPCP23582 126 aa7.2□□□□□ -1.26
RNF4-221ENST00000513643 IL15RAQ13261 267 aa7.2□□□□□ -1.26
RNF4-221ENST00000513643 C4orf46Q504U0 113 aa7.2□□□□□ -1.26
RNF4-221ENST00000513643 THAP8Q8NA92 274 aa7.2□□□□□ -1.26
RNF4-221ENST00000513643 SPATA25Q9BR10 227 aa7.2□□□□□ -1.26
RNF4-221ENST00000513643 TENM2Q9NT68 2774 aa7.2□□□□□ -1.26
RNF4-221ENST00000513643 IGHV3OR16-13A0A075B7E8 117 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 IGHV3-49A0A0A0MS15 119 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 IGHV3-74A0A0B4J1X5 117 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 OR4C46A6NHA9 309 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 BUB3O43684 328 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 UPK1BO75841 260 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 DFFBO76075 338 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 IFNA4P05014 189 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 RD3LP0DJH9 198 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 IAPPP10997 89 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 PSG1P11464 419 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 POLR2GP62487 172 aaKnown RBP eCLIP7.19□□□□□ -1.26
RNF4-221ENST00000513643 USF2Q15853 346 aaPredicted RBP7.19□□□□□ -1.26
RNF4-221ENST00000513643 TMEM14EPQ6UXP3 125 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 TCF24Q7RTU0 167 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 STPG3Q8N7X2 389 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 ZNF431Q8TF32 576 aaPredicted RBP7.19□□□□□ -1.26
RNF4-221ENST00000513643 Q8WTZ3 238 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 SMIM8Q96KF7 97 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 WDR12Q9GZL7 423 aaKnown RBP7.19□□□□□ -1.26
RNF4-221ENST00000513643 MAGT1Q9H0U3 335 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 C11orf1Q9H5F2 150 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 ZMAT4Q9H898 229 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 NUDT15Q9NV35 164 aa7.19□□□□□ -1.26
RNF4-221ENST00000513643 LYSTQ99698 3801 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 A0A1W2PS18 150 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 WRBO00258 174 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 SCGB2A1O75556 95 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 IFNA21P01568 189 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 IL5P05113 134 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 BMI1P35226 326 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 NKX2-1P43699 371 aaPredicted RBP7.18□□□□□ -1.26
RNF4-221ENST00000513643 CMC4P56277 68 aaPredicted RBP7.18□□□□□ -1.26
RNF4-221ENST00000513643 TAS2R30P59541 319 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 RAB11AP62491 216 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 ZNF90Q03938 601 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 ZNF846Q147U1 533 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 C16orf54Q6UWD8 224 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 ZBTB8BQ8NAP8 495 aaPredicted RBP7.18□□□□□ -1.26
RNF4-221ENST00000513643 DCANP1Q8TF63 244 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 GLMPQ8WWB7 406 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 ACY3Q96HD9 319 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 METTL26Q96S19 204 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms