RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 PRELID1Q9Y255 219 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 PUS1Q9Y606 427 aaKnown RBP eCLIP10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 TSPAN4O14817 238 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 CNIH1O95406 144 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 AREGP15514 252 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 GCHFRP30047 84 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 GNB1P62873 340 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 ZNF562Q6V9R5 426 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 PQLC2Q6ZP29 291 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 CBLN2Q8IUK8 224 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 ABHD5Q8WTS1 349 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 ACY3Q96HD9 319 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 TMEM167BQ9NRX6 74 aa10.42□□□□□ -0.74
DEPDC1B-206ENST00000512452 PSMB11A5LHX3 300 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 CXorf65A6NEN9 183 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 FCN1O00602 326 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 NPFFO15130 113 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 HMGB3O15347 200 aaKnown RBP10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 PAGE4O60829 102 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 ARL14EPLP0DKL9 152 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 SLC25A16P16260 332 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 CTRB1P17538 263 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 BPIFB3P59826 476 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 KRTAP1-1Q07627 177 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 HES1Q14469 280 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 CTRB2Q6GPI1 263 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 TMEM88Q6PEY1 159 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 IQCF2Q8IXL9 164 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 LRRC75A-AS1Q8N1F1 130 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 OR2T6Q8NHC8 308 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 NPIPB3Q92617 1050 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 TMPRSS5Q9H3S3 457 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 NAT8Q9UHE5 227 aa10.41□□□□□ -0.74
DEPDC1B-206ENST00000512452 IGKV1D-37A0A075B6S9 117 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 ELOA3CA0A087WX78 387 aaPredicted RBP10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 IGHV4-61A0A0C4DH41 118 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 NPIPB5A8MRT5 1133 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 ZNF727A8MUV8 499 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 C11orf94C9JXX5 98 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 NUPL2O15504 423 aaKnown RBP10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 REG1AP05451 166 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 FABP1P07148 127 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 TMEM11P17152 192 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 RND2P52198 227 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 CEBPGP53567 150 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 MFAP2P55001 183 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 FXYD3Q14802 87 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 MLANAQ16655 118 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 FAM78BQ5VT40 261 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 DYNAPQ8N1N2 210 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 OR4F5Q8NH21 305 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 MISP3Q96FF7 219 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 AJUBAQ96IF1 538 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 OR4F4Q96R69 305 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 SDF2L1Q9HCN8 221 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 SEPSECSQ9HD40 501 aaKnown RBP10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 DNAJC4Q9NNZ3 241 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 TMEM242Q9NWH2 141 aa10.4□□□□□ -0.74
DEPDC1B-206ENST00000512452 A0A1W2PRD5 423 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 A0A1W2PRF3 423 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 A0A1W2PRM7 423 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 HLA-DRB1P01911 266 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 C8orf88P0DMB2 117 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 GATA3P23771 443 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 SAA4P35542 130 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 PLP1P60201 277 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 TMEM241Q24JQ0 296 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 OR4X1Q8NH49 305 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 SMIM7Q9BQ49 75 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 SLC25A33Q9BSK2 321 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 CTDSP1Q9GZU7 261 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 TNFRSF19Q9NS68 423 aa10.39□□□□□ -0.75
DEPDC1B-206ENST00000512452 MGAM2Q2M2H8 2515 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 COLCA2A8K830 154 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 I3L2K1 104 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 COX7A2P2O60397 106 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 MT-ND4LP03901 98 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 DEFA4P12838 97 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 FOLR2P14207 255 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 RNF212Q495C1 297 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 MIR17HGQ75NE6 70 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 TTC9CQ8N5M4 171 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 STXBP6Q8NFX7 210 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 SGMS2Q8NHU3 365 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 TMEM190Q8WZ59 177 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 ARPC1AQ92747 370 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 ZNF48Q96MX3 618 aaPredicted RBP10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 UHRF2Q96PU4 802 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 WNT10AQ9GZT5 417 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 DOK5Q9P104 306 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 CDC42EP3Q9UKI2 254 aa10.38□□□□□ -0.75
DEPDC1B-206ENST00000512452 IGHV4-30-2A0A087WSY4 118 aa10.37□□□□□ -0.75
DEPDC1B-206ENST00000512452 IGHV1-69DA0A0B4J2H0 117 aa10.37□□□□□ -0.75
DEPDC1B-206ENST00000512452 CENPVL3A0A0U1RRI6 287 aa10.37□□□□□ -0.75
DEPDC1B-206ENST00000512452 EIF3GO75821 320 aaKnown RBP eCLIP10.37□□□□□ -0.75
DEPDC1B-206ENST00000512452 IGHV1-69P01742 117 aa10.37□□□□□ -0.75
DEPDC1B-206ENST00000512452 MSMBP08118 114 aa10.37□□□□□ -0.75
DEPDC1B-206ENST00000512452 CX3CL1P78423 397 aa10.37□□□□□ -0.75
DEPDC1B-206ENST00000512452 SRSF2Q01130 221 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms