RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 MRPL57Q9BQC6 102 aaKnown RBP0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 C22orf24Q9Y442 160 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 KMT2BQ9UMN6 2715 aaPredicted RBP0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 A0A087X0T9 212 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 ZNF682O95780 498 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 SERPINE1P05121 402 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 C8GP07360 202 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR4E1P0C645 316 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 MIFP14174 115 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 HIST1H3AP68431 136 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 RHOGP84095 191 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 H3F3AP84243 136 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 TMEM97Q5BJF2 176 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 FAM19A2Q8N3H0 131 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR8D4Q8NGM9 314 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 SFT2D1Q8WV19 159 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 ACER3Q9NUN7 267 aa0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 NHP2Q9NX24 153 aaKnown RBP0.91□□□□□ -2.26
TRAPPC11-207ENST00000511409 PIK3C2GO75747 1445 aa0.9□□□□□ -2.26
TRAPPC11-207ENST00000511409 ZFYVE9O95405 1425 aa0.9□□□□□ -2.26
TRAPPC11-207ENST00000511409 TECTAO75443 2155 aa0.9□□□□□ -2.26
TRAPPC11-207ENST00000511409 CTAG1AP78358 180 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 PDE6HQ13956 83 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 DEFB115Q30KQ5 88 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 BRMS1LQ5PSV4 323 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 BTF3L4Q96K17 158 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 C2orf50Q96LR7 162 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 SIGMAR1Q99720 223 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 HIST1H2BLQ99880 126 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 KIFC1Q9BW19 673 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 TVP23BQ9NYZ1 205 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 FBXO5Q9UKT4 447 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 EPDR1Q9UM22 224 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 SLC22A13Q9Y226 551 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 UTP11Q9Y3A2 253 aaKnown RBP0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 RTL1A6NKG5 1358 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 NEO1Q92859 1461 aa0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 ZNF106Q9H2Y7 1883 aaKnown RBP0.9□□□□□ -2.27
TRAPPC11-207ENST00000511409 PLXND1Q9Y4D7 1925 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 EXPH5Q8NEV8 1989 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 SCN10AQ9Y5Y9 1956 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 TRBV6-8A0A0A6YYG3 113 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 IGKV1-9A0A0C4DH69 117 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 C7orf71A4D174 169 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 J3QRK9 145 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 CYB5BO43169 146 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 ANP32AP39687 249 aaKnown RBP0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 AP3S2P59780 193 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 TSNQ15631 228 aaKnown RBP0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 LYRM7Q5U5X0 104 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 Q6Q795 121 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 LCA10Q71F78 164 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 OR52L1Q8NGH7 329 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 WFDC5Q8TCV5 224 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 FAM172AQ8WUF8 416 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 C6orf62Q9GZU0 229 aaPredicted RBP0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 UCK1Q9HA47 277 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 IDI2-AS1Q9NZ38 188 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 CCDC144AA2RUR9 1427 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 NCOA1Q15788 1441 aa0.89□□□□□ -2.27
TRAPPC11-207ENST00000511409 EML6Q6ZMW3 1958 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 CACNA1BQ00975 2339 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 TRAV12-1A0A0B4J245 112 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 CLDN25C9JDP6 229 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 C19orf84I3L1E1 186 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 LYZL6O75951 148 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 EIF5AP63241 154 aaKnown RBP0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 CCL7P80098 99 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 C12orf45Q8N5I9 185 aaPredicted RBP0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 LINC00301Q8NCQ3 95 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 OR2T10Q8NGZ9 312 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 OR10J5Q8NHC4 309 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 OBSCN-AS1Q96MR7 158 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 NMNAT1Q9HAN9 279 aaPredicted RBP0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 RASL12Q9NYN1 266 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 HS3ST2Q9Y278 367 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 ZFP30Q9Y2G7 519 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 COL4A5P29400 1685 aa0.88□□□□□ -2.27
TRAPPC11-207ENST00000511409 E2F6O75461 281 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 OR7C1O76099 320 aaPredicted RBP0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 HAND1O96004 215 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 S100A6P06703 90 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 ERP29P30040 261 aaKnown RBP0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 ESRGQ1W209 222 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 LIN52Q52LA3 116 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 TEX261Q6UWH6 196 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 CLECL1Q8IZS7 167 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 Q8N814 137 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 GNPDA2Q8TDQ7 276 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 ZNF418Q8TF45 676 aaPredicted RBP0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 FAM32AQ9Y421 112 aaKnown RBP0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 U3KQ87 197 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 ROS1P08922 2347 aa0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 MED1Q15648 1581 aaPredicted RBP0.87□□□□□ -2.27
TRAPPC11-207ENST00000511409 NCOA6Q14686 2063 aaPredicted RBP0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 LOC110117498A0A087WWA1 95 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 CCDC160A6NGH7 325 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 SRIP30626 198 aa0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 SRP14P37108 136 aaKnown RBP0.86□□□□□ -2.27
TRAPPC11-207ENST00000511409 SERPINB9P50453 376 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms