RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 OR1L4Q8NGR5 311 aa10.44□□□□□ -0.74
HMGB2-205ENST00000511316 VN1R17PQ8TDU5 208 aa10.44□□□□□ -0.74
HMGB2-205ENST00000511316 NABP2Q9BQ15 211 aa10.44□□□□□ -0.74
HMGB2-205ENST00000511316 LINC00574Q9H8X3 128 aa10.44□□□□□ -0.74
HMGB2-205ENST00000511316 SLC35D1Q9NTN3 355 aa10.44□□□□□ -0.74
HMGB2-205ENST00000511316 AURKAIP1Q9NWT8 199 aaPredicted RBP10.44□□□□□ -0.74
HMGB2-205ENST00000511316 OR51B2Q9Y5P1 312 aa10.44□□□□□ -0.74
HMGB2-205ENST00000511316 KBTBD11-OT1A0A1B0GTJ5 212 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 PGPEP1LA6NFU8 196 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 PROP1O75360 226 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 CA2P00918 260 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 APOBEC3AP31941 199 aaPredicted RBP10.43□□□□□ -0.74
HMGB2-205ENST00000511316 PRRX1P54821 245 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 RPS16P62249 146 aaKnown RBP10.43□□□□□ -0.74
HMGB2-205ENST00000511316 PRSS8Q16651 343 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 IBA57Q5T440 356 aaKnown RBP10.43□□□□□ -0.74
HMGB2-205ENST00000511316 STXBP6Q8NFX7 210 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 ZNF714Q96N38 554 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 GNB4Q9HAV0 340 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 BET1LQ9NYM9 111 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 TBL2Q9Y4P3 447 aaKnown RBP10.43□□□□□ -0.74
HMGB2-205ENST00000511316 SOX21Q9Y651 276 aaPredicted RBP10.43□□□□□ -0.74
HMGB2-205ENST00000511316 MED13LQ71F56 2210 aa10.43□□□□□ -0.74
HMGB2-205ENST00000511316 SLC17A3O00476 420 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 APCSP02743 223 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 LINC00869P0C866 280 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 CGB3P0DN86 165 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 CGB7P0DN87 165 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 DEFA4P12838 97 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 LINC00310P59036 64 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 SELENOVP59797 346 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 BPIFB3P59826 476 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 MUC15Q8N387 334 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 OR4A5Q8NH83 315 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 Q8TCH9 128 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 RBM14Q96PK6 669 aaKnown RBP10.42□□□□□ -0.74
HMGB2-205ENST00000511316 ATG101Q9BSB4 218 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 SAP30LQ9HAJ7 183 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 LPAR2Q9HBW0 351 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 NRN1Q9NPD7 142 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 IDI2-AS1Q9NZ38 188 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 DUSP13Q9UII6 198 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 MRPS16Q9Y3D3 137 aaKnown RBP10.42□□□□□ -0.74
HMGB2-205ENST00000511316 PAM16Q9Y3D7 125 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 IGKV1D-17A0A075B6S4 117 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 A0A1W2PN81 502 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 J3QR06 171 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 UPK2O00526 184 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 IRF2P14316 349 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 G0S2P27469 103 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 CDKN1AP38936 164 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 CTRLP40313 264 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 GATA4P43694 442 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 KRTDAPP60985 99 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 MRPS11P82912 194 aaKnown RBP10.42□□□□□ -0.74
HMGB2-205ENST00000511316 OSR1Q8TAX0 266 aaPredicted RBP10.42□□□□□ -0.74
HMGB2-205ENST00000511316 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 MSL2Q9HCI7 577 aa10.42□□□□□ -0.74
HMGB2-205ENST00000511316 ANK3Q12955 4377 aaKnown RBP10.41□□□□□ -0.74
HMGB2-205ENST00000511316 OR7C2O60412 319 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 IGHV3-13P01766 116 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 CRYBB3P26998 211 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 FABP6P51161 128 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 SUB1P53999 127 aaKnown RBP eCLIP10.41□□□□□ -0.749e-31■■■■□ 23.1
HMGB2-205ENST00000511316 KLF5Q13887 457 aaPredicted RBP10.41□□□□□ -0.74
HMGB2-205ENST00000511316 RPL39P5Q59GN2 51 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 PRSS57Q6UWY2 283 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 OR2D3Q8NGH3 330 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 VSTM2AQ8TAG5 236 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 PERPQ96FX8 193 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 METRNQ9UJH8 293 aa10.41□□□□□ -0.74
HMGB2-205ENST00000511316 C3orf80F5H4A9 247 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 IGHV4-39P01824 125 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 HIST1H1EP10412 219 aaKnown RBP10.4□□□□□ -0.74
HMGB2-205ENST00000511316 HNRNPA3P51991 378 aaKnown RBP10.4□□□□□ -0.74
HMGB2-205ENST00000511316 ERHP84090 104 aaKnown RBP10.4□□□□□ -0.74
HMGB2-205ENST00000511316 SPATA45Q537H7 98 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 FAM71F2Q6NXP2 309 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 MIR17HGQ75NE6 70 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 OR2Z1Q8NG97 314 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 ORAOV1Q8WV07 137 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 C1orf159Q96HA4 380 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 GRAMD2BQ96HH9 432 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 IGF2BP2-AS1Q96M15 143 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 TXN2Q99757 166 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 SLC25A33Q9BSK2 321 aa10.4□□□□□ -0.74
HMGB2-205ENST00000511316 DOCK11Q5JSL3 2073 aa10.4□□□□□ -0.75
HMGB2-205ENST00000511316 A0A1W2PS18 150 aa10.4□□□□□ -0.75
HMGB2-205ENST00000511316 LHBP01229 141 aa10.4□□□□□ -0.75
HMGB2-205ENST00000511316 APOA2P02652 100 aa10.4□□□□□ -0.75
HMGB2-205ENST00000511316 SAA2P0DJI9 122 aaPredicted RBP10.4□□□□□ -0.75
HMGB2-205ENST00000511316 GLRXP35754 106 aa10.4□□□□□ -0.75
HMGB2-205ENST00000511316 COMPP49747 757 aaPredicted RBP10.4□□□□□ -0.75
HMGB2-205ENST00000511316 CD69Q07108 199 aa10.4□□□□□ -0.75
HMGB2-205ENST00000511316 STUMQ69YW2 141 aa10.4□□□□□ -0.75
HMGB2-205ENST00000511316 ZCCHC24Q8N2G6 241 aaKnown RBP10.4□□□□□ -0.75
HMGB2-205ENST00000511316 CIARTQ8N365 385 aaPredicted RBP10.4□□□□□ -0.75
HMGB2-205ENST00000511316 TPRX1Q8N7U7 411 aa10.4□□□□□ -0.75
HMGB2-205ENST00000511316 FBXL7Q9UJT9 491 aa10.4□□□□□ -0.75
HMGB2-205ENST00000511316 NIPBLQ6KC79 2804 aaeCLIP10.39□□□□□ -0.751e-56■□□□□ 8.2
Retrieved 100 of 20,778 RNA–protein pairs in 1924.8 ms