RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 MAJINQ3KP22 176 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 CENPVQ7Z7K6 275 aaPredicted RBP12.21□□□□□ -0.45
USP38-202ENST00000510377 KIR3DL3Q8N743 410 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 STXBP6Q8NFX7 210 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 CLEC7AQ9BXN2 247 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 NGBQ9NPG2 151 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 PMS2P5A8MQ11 134 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 CDX4O14627 284 aaPredicted RBP12.21□□□□□ -0.45
USP38-202ENST00000510377 SELENOTP62341 195 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 ZNF841Q6ZN19 808 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 BPIFA4PQ86YQ2 179 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 PPIAL4EA0A075B759 164 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 FAM90A27PA6NNH2 459 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 PPIAL4DF5H284 164 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 PPIAL4FP0DN26 164 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 ZNF138P52744 262 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 PRRX1P54821 245 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 PRCDQ00LT1 54 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 TSKUQ8WUA8 353 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 RAB37Q96AX2 223 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 ONECUT1Q9UBC0 465 aa12.21□□□□□ -0.46
USP38-202ENST00000510377 ASCL5Q7RTU5 278 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 MRPL32Q9BYC8 188 aaKnown RBP12.2□□□□□ -0.46
USP38-202ENST00000510377 GP6Q9HCN6 339 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 HIGD1AQ9Y241 93 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 V9GYV3 84 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 A0A1W2PRE2 83 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 FAM90A1Q86YD7 464 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 OR4C13Q8NGP0 309 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 ZFP30Q9Y2G7 519 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 FBLL1A6NHQ2 334 aaKnown RBP12.2□□□□□ -0.46
USP38-202ENST00000510377 GGTLC3B5MD39 225 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 GLRXP35754 106 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 OR10J3Q5JRS4 329 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 TPTE2P1Q5T6R2 138 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 NIT1Q86X76 327 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 ASCL2Q99929 193 aa12.2□□□□□ -0.46
USP38-202ENST00000510377 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 CA7P43166 264 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 PDLIM4P50479 330 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 C19orf24Q9BVV8 132 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 CREBBPQ92793 2442 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 NCBP2LA6PVI3 153 aaKnown RBP12.19□□□□□ -0.46
USP38-202ENST00000510377 FAM87AP0C7U9 286 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 MDS2Q8NDY4 140 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 SLC25A33Q9BSK2 321 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 AAMDCQ9H7C9 122 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 HSPB8Q9UJY1 196 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 SPEGQ15772 3267 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 hDV102S1A0JD36 115 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 CORTO00230 105 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 NMUP48645 174 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 RIGQ13278 110 aa12.19□□□□□ -0.46
USP38-202ENST00000510377 ALKBH7Q9BT30 221 aaPredicted RBP12.19□□□□□ -0.46
USP38-202ENST00000510377 KIR2DL5BA0A0G2JN68 375 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 KIR2DL5BA0A0G2JPC4 375 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 AHRRA9YTQ3 701 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 SLAQ13239 276 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 KIR2DL5AQ8N109 375 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 STPG4Q8N801 248 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 C5orf17Q8NAS9 161 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 DCAF16Q9NXF7 216 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 FOXA2Q9Y261 457 aaPredicted RBP12.18□□□□□ -0.46
USP38-202ENST00000510377 PTPN13Q12923 2485 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 C10orf142B7Z368 130 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 NUP35Q8NFH5 326 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 IGHV3-35A0A0C4DH35 117 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 PPOXP50336 477 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 WFDC3Q8IUB2 231 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 C11orf53Q8IXP5 236 aa12.18□□□□□ -0.46
USP38-202ENST00000510377 TRAV8-1A0A0A6YYK1 113 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 C15orf65H3BRN8 121 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 UCNP55089 124 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 RPL24P83731 157 aaKnown RBP12.17□□□□□ -0.46
USP38-202ENST00000510377 Q0VG73 95 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 FAM168AQ92567 244 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 TRANK1O15050 2925 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 FAM181BA6NEQ2 426 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 BRWD1-AS2P59051 145 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 RPP21Q9H633 154 aaKnown RBP12.17□□□□□ -0.46
USP38-202ENST00000510377 RAXQ9Y2V3 346 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 SCGB2A1O75556 95 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 TSPOP30536 169 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 OSR1Q8TAX0 266 aaPredicted RBP12.17□□□□□ -0.46
USP38-202ENST00000510377 GPR82Q96P67 336 aa12.17□□□□□ -0.46
USP38-202ENST00000510377 FAM90A9PA6NNJ1 464 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 MMP23AO75900 390 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 TEX43Q6ZNM6 134 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 CFAP54Q96N23 3096 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 ZGRF1Q86YA3 2104 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 GNG7O60262 68 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 HLA-DRB1P01911 266 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 PRSS1P07477 247 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 IGLC2P0DOY2 106 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 IGLC3P0DOY3 106 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 MPV17L2Q567V2 206 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 C18orf32Q8TCD1 76 aa12.16□□□□□ -0.46
USP38-202ENST00000510377 EPDR1Q9UM22 224 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms