RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZNF600Q6ZNG1 722 aa10.12□□□□□ -0.79
SNF8-206ENST00000509989 SLC16A13Q7RTY0 426 aa10.12□□□□□ -0.79
SNF8-206ENST00000509989 GTSCR1Q86UQ5 136 aa10.12□□□□□ -0.79
SNF8-206ENST00000509989 OR4D5Q8NGN0 318 aa10.12□□□□□ -0.79
SNF8-206ENST00000509989 MARC2Q969Z3 335 aa10.12□□□□□ -0.79
SNF8-206ENST00000509989 NUDT15Q9NV35 164 aa10.12□□□□□ -0.79
SNF8-206ENST00000509989 TRAV14DV4A0A0A6YYC5 116 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 PRSS46E5RG02 174 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 SYNGR2O43760 224 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 SLC25A6P12236 298 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 TFPI2P48307 235 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 DCTN2Q13561 401 aaKnown RBP10.11□□□□□ -0.79
SNF8-206ENST00000509989 GAMTQ14353 236 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 ODF3L2Q3SX64 289 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 FAM90A2PQ658T7 463 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 RBPMS2Q6ZRY4 209 aaKnown RBP10.11□□□□□ -0.79
SNF8-206ENST00000509989 LINC00299Q6ZSB3 139 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 GBGT1Q8N5D6 347 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
SNF8-206ENST00000509989 MITD1Q8WV92 249 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 S100ZQ8WXG8 99 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 SRD5A3Q9H8P0 318 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 GAR1Q9NY12 217 aaKnown RBP10.11□□□□□ -0.79
SNF8-206ENST00000509989 PAIP2BQ9ULR5 123 aaKnown RBP10.11□□□□□ -0.79
SNF8-206ENST00000509989 U3KQK5 164 aa10.11□□□□□ -0.79
SNF8-206ENST00000509989 DNAH7Q8WXX0 4024 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 IGKV1OR2-108A0A075B7D4 117 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 TSPAN4O14817 238 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 UPK1BO75841 260 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 DFFBO76075 338 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 IFNA4P05014 189 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 OR10J1P30954 320 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 PAX9P55771 341 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 ID3Q02535 119 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 ASAH1Q13510 395 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 ZNF846Q147U1 533 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 USF2Q15853 346 aaPredicted RBP10.1□□□□□ -0.79
SNF8-206ENST00000509989 FAM24BQ8N5W8 94 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 COQ8AQ8NI60 647 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 TM2D3Q9BRN9 247 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 VSIRQ9H7M9 311 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 U3KQ87 197 aa10.1□□□□□ -0.79
SNF8-206ENST00000509989 TRAV25A0A0B4J276 109 aa10.09□□□□□ -0.79
SNF8-206ENST00000509989 FAM90A26D6RGX4 464 aa10.09□□□□□ -0.79
SNF8-206ENST00000509989 H2AFB2P0C5Z0 115 aa10.09□□□□□ -0.79
SNF8-206ENST00000509989 ZNF90Q03938 601 aa10.09□□□□□ -0.79
SNF8-206ENST00000509989 TMEM182Q6ZP80 229 aaPredicted RBP10.09□□□□□ -0.79
SNF8-206ENST00000509989 ZBTB8BQ8NAP8 495 aaPredicted RBP10.09□□□□□ -0.79
SNF8-206ENST00000509989 RCHY1Q96PM5 261 aa10.09□□□□□ -0.79
SNF8-206ENST00000509989 FAM110AQ9BQ89 295 aa10.09□□□□□ -0.79
SNF8-206ENST00000509989 TUBA4BQ9H853 241 aa10.09□□□□□ -0.79
SNF8-206ENST00000509989 FAM240BA0A1B0GVZ2 78 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 RPS10-NUDT3A0A1W2PQS6 291 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 PMS2P5A8MQ11 134 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 SSSCA1O60232 199 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 SCGB1D2O95969 90 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 NHLRC4P0CG21 123 aaPredicted RBP10.08□□□□□ -0.8
SNF8-206ENST00000509989 PSG1P11464 419 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 SLC25A4P12235 298 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 SPANXN5Q5MJ07 72 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 TCF24Q7RTU0 167 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 WFDC3Q8IUB2 231 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 APRG1Q8IVJ8 170 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 STPG3Q8N7X2 389 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 RCL1Q9Y2P8 373 aaKnown RBP10.08□□□□□ -0.8
SNF8-206ENST00000509989 U3KQE9 123 aa10.08□□□□□ -0.8
SNF8-206ENST00000509989 CRYBB3P26998 211 aa10.07□□□□□ -0.8
SNF8-206ENST00000509989 NKX2-1P43699 371 aaPredicted RBP10.07□□□□□ -0.8
SNF8-206ENST00000509989 OR2F1Q13607 317 aa10.07□□□□□ -0.8
SNF8-206ENST00000509989 IAH1Q2TAA2 248 aaPredicted RBP10.07□□□□□ -0.8
SNF8-206ENST00000509989 NRARPQ7Z6K4 114 aa10.07□□□□□ -0.8
SNF8-206ENST00000509989 OR51G1Q8NGK1 321 aa10.07□□□□□ -0.8
SNF8-206ENST00000509989 OR1S2Q8NGQ3 325 aa10.07□□□□□ -0.8
SNF8-206ENST00000509989 ZNF431Q8TF32 576 aaPredicted RBP10.07□□□□□ -0.8
SNF8-206ENST00000509989 SPAG8Q99932 426 aaPredicted RBP10.07□□□□□ -0.8
SNF8-206ENST00000509989 WDR12Q9GZL7 423 aaKnown RBP10.07□□□□□ -0.8
SNF8-206ENST00000509989 BATF3Q9NR55 127 aa10.07□□□□□ -0.8
SNF8-206ENST00000509989 GSKIPQ9P0R6 139 aa10.07□□□□□ -0.8
SNF8-206ENST00000509989 TOMM40O96008 361 aa10.06□□□□□ -0.8
SNF8-206ENST00000509989 IFNA21P01568 189 aa10.06□□□□□ -0.8
SNF8-206ENST00000509989 MBPP02686 304 aaPredicted RBP10.06□□□□□ -0.8
SNF8-206ENST00000509989 IL4P05112 153 aa10.06□□□□□ -0.8
SNF8-206ENST00000509989 GATA2P23769 480 aaPredicted RBP10.06□□□□□ -0.8
SNF8-206ENST00000509989 YPEL3P61236 119 aaPredicted RBP10.06□□□□□ -0.8
SNF8-206ENST00000509989 ARL16Q0P5N6 197 aa10.06□□□□□ -0.8
SNF8-206ENST00000509989 C12orf45Q8N5I9 185 aaPredicted RBP10.06□□□□□ -0.8
SNF8-206ENST00000509989 GINS3Q9BRX5 216 aa10.06□□□□□ -0.8
SNF8-206ENST00000509989 PSENENQ9NZ42 101 aa10.06□□□□□ -0.8
SNF8-206ENST00000509989 TRAV30A0A087WSZ9 112 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 FAM25EA8MYX2 175 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 MED6O75586 246 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 NPPCP23582 126 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 GPX4P36969 197 aaPredicted RBP10.05□□□□□ -0.8
SNF8-206ENST00000509989 P2RY1P47900 373 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 LAMTOR1Q6IAA8 161 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 ETFRF1Q6IPR1 90 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 Q8WTZ3 238 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 MS4A6AQ9H2W1 248 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 C11orf1Q9H5F2 150 aa10.05□□□□□ -0.8
SNF8-206ENST00000509989 MAP6D1Q9H9H5 199 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms