RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 ATP6V1FQ16864 119 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 KLK9Q2XQG4 91 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 ACSM6Q6P461 480 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 UNQ5815/PRO19632Q6UWF5 114 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 BAP18Q8IXM2 172 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 PINX1Q96BK5 328 aaKnown RBP11.2□□□□□ -0.62
HMGCL-208ENST00000509389 GINS3Q9BRX5 216 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 ENY2Q9NPA8 101 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 ZC4H2Q9NQZ6 224 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 KLK9Q9UKQ9 250 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 IFNA10P01566 189 aa11.19□□□□□ -0.62
HMGCL-208ENST00000509389 IGHV3-11P01762 117 aa11.19□□□□□ -0.62
HMGCL-208ENST00000509389 CRYGCP07315 174 aa11.19□□□□□ -0.62
HMGCL-208ENST00000509389 DLK1P80370 383 aa11.19□□□□□ -0.62
HMGCL-208ENST00000509389 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
HMGCL-208ENST00000509389 AKIRIN2Q53H80 203 aa11.19□□□□□ -0.62
HMGCL-208ENST00000509389 ARPC1AQ92747 370 aa11.19□□□□□ -0.62
HMGCL-208ENST00000509389 MS4A10Q96PG2 267 aa11.19□□□□□ -0.62
HMGCL-208ENST00000509389 SMIM3Q9BZL3 60 aa11.19□□□□□ -0.62
HMGCL-208ENST00000509389 HSPB1P04792 205 aaKnown RBP11.18□□□□□ -0.62
HMGCL-208ENST00000509389 GP9P14770 177 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 AREGP15514 252 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 CTRB1P17538 263 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 FXYD3Q14802 87 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 CTRB2Q6GPI1 263 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 TMEM217Q8N7C4 229 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 LFNGQ8NES3 379 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 OR10P1Q8NGE3 313 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 RNASEH2CQ8TDP1 164 aaKnown RBP11.18□□□□□ -0.62
HMGCL-208ENST00000509389 RCHY1Q96PM5 261 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 TMEM147Q9BVK8 224 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 HINT2Q9BX68 163 aa11.18□□□□□ -0.62
HMGCL-208ENST00000509389 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
HMGCL-208ENST00000509389 BORCS7-ASMTA0A0B4J1R7 106 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 RPS10-NUDT3A0A1W2PQS6 291 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 NPIPB5A8MRT5 1133 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 IFNA7P01567 189 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 FRMD6-AS1P0C7T7 363 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 SPP1P10451 314 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 MFAP2P55001 183 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 TPPP2P59282 170 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 RAB11AP62491 216 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 CLINT1Q14677 625 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 OR1P1Q8NH06 330 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 SCARB1Q8WTV0 552 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 DMRT1Q9Y5R6 373 aa11.17□□□□□ -0.62
HMGCL-208ENST00000509389 SEC11BP0C7V7 166 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 OR13C7P0DN81 318 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 OR8G2PQ6IF36 304 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 MUC7Q8TAX7 377 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 WDR61Q9GZS3 305 aaKnown RBP11.16□□□□□ -0.62
HMGCL-208ENST00000509389 UQCC1Q9NVA1 299 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 WDR83OSQ9Y284 106 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 DYNC2H1Q8NCM8 4307 aaKnown RBP11.16□□□□□ -0.62
HMGCL-208ENST00000509389 DNAH7Q8WXX0 4024 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 CORTO00230 105 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 TRGV3P03979 118 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 LILRB2Q8N423 598 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 TTC9CQ8N5M4 171 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 CACNG8Q8WXS5 425 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 PSMG3Q9BT73 122 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-208ENST00000509389 UBQLN2Q9UHD9 624 aa11.16□□□□□ -0.62
HMGCL-208ENST00000509389 CNIH1O95406 144 aa11.15□□□□□ -0.63
HMGCL-208ENST00000509389 ATP6V0CP27449 155 aa11.15□□□□□ -0.63
HMGCL-208ENST00000509389 GPX4P36969 197 aaPredicted RBP11.15□□□□□ -0.63
HMGCL-208ENST00000509389 SNCAP37840 140 aa11.15□□□□□ -0.63
HMGCL-208ENST00000509389 SUB1P53999 127 aaKnown RBP eCLIP11.15□□□□□ -0.63
HMGCL-208ENST00000509389 CASC10Q5T4H9 136 aa11.15□□□□□ -0.63
HMGCL-208ENST00000509389 ALKAL2Q6UX46 152 aa11.15□□□□□ -0.63
HMGCL-208ENST00000509389 OR1L6Q8NGR2 347 aa11.15□□□□□ -0.63
HMGCL-208ENST00000509389 TMEM68Q96MH6 324 aa11.15□□□□□ -0.63
HMGCL-208ENST00000509389 FNDC4Q9H6D8 234 aaPredicted RBP11.15□□□□□ -0.63
HMGCL-208ENST00000509389 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.63
HMGCL-208ENST00000509389 TIMM9Q9Y5J7 89 aa11.15□□□□□ -0.63
HMGCL-208ENST00000509389 UBE2L5PA0A1B0GUS4 154 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 MPDU1O75352 247 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 BRI3O95415 125 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 IFNA4P05014 189 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 EIF5AL1Q6IS14 154 aaKnown RBP11.14□□□□□ -0.63
HMGCL-208ENST00000509389 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 OR2G3Q8NGZ4 309 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 GNPNAT1Q96EK6 184 aaPredicted RBP11.14□□□□□ -0.63
HMGCL-208ENST00000509389 ELOVL1Q9BW60 279 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 ZMAT4Q9H898 229 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
HMGCL-208ENST00000509389 IGLV11-55A0A075B6I3 123 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 H3BUA1 57 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 IFNA5P01569 189 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 IGLV1-51P01701 117 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 REG1AP05451 166 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 NMBP08949 121 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 SULT1A2P50226 295 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 CLLU1Q5K131 121 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 SLC16A13Q7RTY0 426 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 Q8N1Y9 231 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 FANCD2OSQ96PS1 177 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 SH3BGRL3Q9H299 93 aa11.13□□□□□ -0.63
HMGCL-208ENST00000509389 TENM2Q9NT68 2774 aa11.12□□□□□ -0.63
HMGCL-208ENST00000509389 I3L2K1 104 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms