RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 RAB3CQ96E17 227 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 LINC01587Q99440 93 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 CENPOQ9BU64 300 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 SSBP4Q9BWG4 385 aaPredicted RBP4.83□□□□□ -1.64
VCAN-207ENST00000507162 SCPEP1Q9HB40 452 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 CCL28Q9NRJ3 127 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 CLEC2DQ9UHP7 191 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 TIMM8BQ9Y5J9 83 aaPredicted RBP4.83□□□□□ -1.64
VCAN-207ENST00000507162 LY96Q9Y6Y9 160 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 MAPK3P27361 379 aaPredicted RBP4.82□□□□□ -1.64
VCAN-207ENST00000507162 TSPOP30536 169 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 ZNF79Q15937 498 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 POU2AF1Q16633 256 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 TIGITQ495A1 244 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 LINC01620Q4KN68 170 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 SIGLEC15Q6ZMC9 328 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 OR51H1Q8NH63 302 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 SECTM1Q8WVN6 248 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 DAZAP1Q96EP5 407 aaKnown RBP4.82□□□□□ -1.64
VCAN-207ENST00000507162 PLGRKTQ9HBL7 147 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 FGF20Q9NP95 211 aaPredicted RBP4.82□□□□□ -1.64
VCAN-207ENST00000507162 OAZ3Q9UMX2 235 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 U3KQE9 123 aa4.82□□□□□ -1.64
VCAN-207ENST00000507162 GAGE12BA1L429 117 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 H3BNG1 76 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 M0R2Z0 102 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 RBFOX2O43251 390 aaKnown RBP eCLIP4.81□□□□□ -1.64
VCAN-207ENST00000507162 ADAP1O75689 374 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 GAGE7O76087 117 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 KRASP01116 189 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 INSP01308 110 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 CTXN2P0C2S0 81 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 GAGE12FP0CL80 117 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 GAGE12GP0CL81 117 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 GAGE12IP0CL82 117 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 GABRB1P18505 474 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 MYL12AP19105 171 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 EVI2AP22794 236 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 CLDN12P56749 244 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 B2MP61769 119 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 MLANAQ16655 118 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 SPINK13Q1W4C9 94 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 SPATA31B1PQ5VZV4 182 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 RHOXF1Q8NHV9 184 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 LGALS14Q8TCE9 139 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 MRPS18AQ9NVS2 196 aaKnown RBP4.81□□□□□ -1.64
VCAN-207ENST00000507162 ORC6Q9Y5N6 252 aa4.81□□□□□ -1.64
VCAN-207ENST00000507162 TRAV12-2A0A075B6T6 113 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 CLN5O75503 358 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 FGF2P09038 288 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 ELK1P19419 428 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 UCP1P25874 307 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 G6PCP35575 357 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 ERHP84090 104 aaKnown RBP4.8□□□□□ -1.64
VCAN-207ENST00000507162 CATR1Q13166 79 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 RAB11BQ15907 218 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 C2orf76Q3KRA6 126 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 AADACL3Q5VUY0 350 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 TMEM144Q7Z5S9 345 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 BAP18Q8IXM2 172 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 BPIFB6Q8NFQ5 453 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 CIRBP-AS1Q8TBR5 109 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 Q8WTZ3 238 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 RBPMSQ93062 196 aaKnown RBP4.8□□□□□ -1.64
VCAN-207ENST00000507162 VSIG2Q96IQ7 327 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 CHAC1Q9BUX1 264 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 DPH3P1Q9H4G8 78 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 PLEKHA2Q9HB19 425 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 ZNF446Q9NWS9 450 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 FKBP11Q9NYL4 201 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 KLK11Q9UBX7 282 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 ELF5Q9UKW6 265 aaPredicted RBP4.8□□□□□ -1.64
VCAN-207ENST00000507162 PRNDQ9UKY0 176 aa4.8□□□□□ -1.64
VCAN-207ENST00000507162 A0A0J9YX75 114 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 A0A0U1RQV1 116 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 MARCH11A6NNE9 402 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 SCGB2A1O75556 95 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 CRYGDP07320 174 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 GADD45AP24522 165 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 SNCAP37840 140 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 LPAR6P43657 344 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 SMN1Q16637 294 aaKnown RBP4.79□□□□□ -1.64
VCAN-207ENST00000507162 SPINK9Q5DT21 86 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 MZT2AQ6P582 158 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 LYSMD2Q8IV50 215 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 TSPAN14Q8NG11 270 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 OR10R2Q8NGX6 335 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 FAM3DQ96BQ1 224 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 C16orf74Q96GX8 76 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 SLC5A7Q9GZV3 580 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 MRPL36Q9P0J6 103 aaKnown RBP4.79□□□□□ -1.64
VCAN-207ENST00000507162 DOK5Q9P104 306 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 RAB22AQ9UL26 194 aa4.79□□□□□ -1.64
VCAN-207ENST00000507162 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.78□□□□□ -1.64
VCAN-207ENST00000507162 TMEM272A0A1B0GTI8 110 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 SLC17A2O00624 439 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 CRXO43186 299 aaPredicted RBP4.78□□□□□ -1.64
VCAN-207ENST00000507162 BUB3O43684 328 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 IGKV1-17P01599 117 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 IGLV2-11P01706 119 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms