RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PPP1R35Q8TAP8 253 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 CACNG8Q8WXS5 425 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 MLST8Q9BVC4 326 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 KLF12Q9Y4X4 402 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 SRRM5B3KS81 715 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 FSTL3O95633 263 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 GNG5P63218 68 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 C17orf58Q2M2W7 97 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 C6orf15Q6UXA7 325 aaPredicted RBP13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 FZR1Q9UM11 496 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 A8MWL6 223 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 M0R296 226 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 SEC11AP67812 179 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 FOXE3Q13461 319 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 PATE2Q6UY27 113 aa13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 LINC00322Q6ZN03 302 aaPredicted RBP13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 MCRIP2Q9BUT9 160 aaKnown RBP13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 CHTOPQ9Y3Y2 248 aaKnown RBP13.84□□□□□ -0.19
SQSTM1-211ENST00000506690 GAGE10A6NGK3 116 aa13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 SRRM4A7MD48 611 aaKnown RBP13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 COX7A2P2O60397 106 aa13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 C10orf113Q5VZT2 155 aa13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 FER1L6-AS1Q8NA97 138 aa13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 ZNRF1Q8ND25 227 aa13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 GPR82Q96P67 336 aa13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 PMCHL2Q9BQD1 86 aa13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 HSPB8Q9UJY1 196 aa13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 EPDR1Q9UM22 224 aa13.83□□□□□ -0.19
SQSTM1-211ENST00000506690 IGKV3-15P01624 115 aa13.83□□□□□ -0.2
SQSTM1-211ENST00000506690 NBEAP1P0C6P0 100 aa13.83□□□□□ -0.2
SQSTM1-211ENST00000506690 ZC2HC1AQ96GY0 325 aa13.83□□□□□ -0.2
SQSTM1-211ENST00000506690 MEOX1P50221 254 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 FABP6P51161 128 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 SSBP2P81877 361 aaPredicted RBP13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 OR10W1Q8NGF6 305 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 OR1L4Q8NGR5 311 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 GFRA4Q9GZZ7 299 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 C19orf71A6NCJ1 209 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 FAM231BA6NCW3 169 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 IGKV1-16P04430 117 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 RIPPLY3P57055 190 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 PGLYRP4Q96LB8 373 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 ARRDC1-AS1Q9H2J1 176 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 ABI3Q9P2A4 366 aa13.82□□□□□ -0.2
SQSTM1-211ENST00000506690 DSCAML1Q8TD84 2053 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 G3V4G9 280 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 ARF6P62330 175 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 TMEM97Q5BJF2 176 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 LINC00696Q6ZRV3 163 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 BPIFA4PQ86YQ2 179 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 ZNF492Q9P255 531 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 IGHV3OR15-7A0A075B7D8 119 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 DLL1O00548 723 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 MOSP00540 346 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 HTR1DP28221 377 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 ZNF138P52744 262 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 RBPMS2Q6ZRY4 209 aaKnown RBP13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 GCSAMQ8N6F7 178 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 OR1B1Q8NGR6 318 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 SGK494Q96LW2 274 aa13.81□□□□□ -0.2
SQSTM1-211ENST00000506690 KBTBD11-OT1A0A1B0GTJ5 212 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 AGFG2O95081 481 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 GTF2H5Q6ZYL4 71 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 NEU4Q8WWR8 484 aaPredicted RBP13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 SPRR3Q9UBC9 169 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 PCNX2A6NKB5 2137 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 PPIAL4DF5H284 164 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 P01737 135 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 SLC25A5P05141 298 aaKnown RBP13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 ZNF137PP52743 207 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 PAX2Q02962 417 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 TMUB1Q9BVT8 246 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 DEFB127Q9H1M4 99 aa13.8□□□□□ -0.2
SQSTM1-211ENST00000506690 H0Y8G0 127 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 CT45A6P0DMU7 189 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 CT45A5P0DMU8 189 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 CT45A7P0DMV0 189 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 MZT1Q08AG7 82 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 PDPNQ86YL7 162 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 RAB9BQ9NP90 201 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 TCRBV4S1A1TA0A5B7 111 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 C9orf118A6NHY6 69 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 CIDEAO60543 219 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 LTAP01374 205 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 SAA1P0DJI8 122 aaPredicted RBP13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 CFHR2P36980 270 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 TMEM177Q53S58 311 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 MBNL2Q5VZF2 373 aaKnown RBP13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 ITLN1Q8WWA0 313 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 FNDC4Q9H6D8 234 aaPredicted RBP13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 ZNF430Q9H8G1 570 aaPredicted RBP13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 NDUFA4L2Q9NRX3 87 aa13.79□□□□□ -0.2
SQSTM1-211ENST00000506690 PRR14LQ5THK1 2151 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 IGKV1D-37A0A075B6S9 117 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 H3BRM9 83 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 CHEK1O14757 476 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 FGF6P10767 208 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 Q6ZT83 130 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 OR2Z1Q8NG97 314 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 JMJD8Q96S16 334 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms