RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 BOLA2-SMG1P6H3BVE0 249 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 M0R135 149 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 CCRL2O00421 344 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 TOR1AO14656 332 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 CDIPTO14735 213 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 RER1O15258 196 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 TPST1O60507 370 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 NDUFB2O95178 105 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 NPPAP01160 153 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 OR5AL1P0C617 328 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 IFI30P13284 250 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 CTLA4P16410 223 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 HTR2CP28335 458 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 CD40LGP29965 261 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 IFNGR2P38484 337 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 RAB25P57735 213 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 SMIM11AP58511 58 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 GNG3P63215 75 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 PRKCDQ05655 676 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 TAL2Q16559 108 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 SMIM21Q3B7S5 101 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 TTC32Q5I0X7 151 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 ERICH5Q6P6B1 374 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 TBPL2Q6SJ96 375 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 SBSPONQ8IVN8 264 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 C4orf33Q8N1A6 199 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 OR5A2Q8NGI9 324 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 OR2T27Q8NH04 317 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 OR52N1Q8NH53 320 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 ANGPTL6Q8NI99 470 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 ZFAND1Q8TCF1 268 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 RORBQ92753 470 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 OR4C12Q96R67 309 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 MAP1LC3CQ9BXW4 147 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 TLNRD1Q9H1K6 362 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 RERGLQ9H628 205 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 CD300AQ9UGN4 299 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 KLK5Q9Y337 293 aaPredicted RBP3.12□□□□□ -1.91
HERC4-213ENST00000506515 FAM32AQ9Y421 112 aaKnown RBP3.12□□□□□ -1.91
HERC4-213ENST00000506515 PLECQ15149 4684 aaKnown RBP3.11□□□□□ -1.91
HERC4-213ENST00000506515 HERC2O95714 4834 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 ANKRD20A5PA0PJZ0 165 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 FGF16O43320 207 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 MPZL2O60487 215 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 CST4P01036 141 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 ZNF728P0DKX0 622 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 RNASE2P10153 161 aaKnown RBP3.11□□□□□ -1.91
HERC4-213ENST00000506515 HLA-GP17693 338 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 NUP62P37198 522 aaPredicted RBP3.11□□□□□ -1.91
HERC4-213ENST00000506515 RAB13P51153 203 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 TCTAP57738 103 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 FMODQ06828 376 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 PMVKQ15126 192 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 ZFAND6Q6FIF0 208 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 RPL13AP3Q6NVV1 102 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 MORN3Q6PF18 240 aaPredicted RBP3.11□□□□□ -1.91
HERC4-213ENST00000506515 DAZ4Q86SG3 579 aaKnown RBP3.11□□□□□ -1.91
HERC4-213ENST00000506515 CACNG8Q8WXS5 425 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 YIPF6Q96EC8 236 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 PPP1R36Q96LQ0 422 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 PRSS27Q9BQR3 290 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 TM2D3Q9BRN9 247 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 SYT4Q9H2B2 425 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 TUBA4BQ9H853 241 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 PLEKHA1Q9HB21 404 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 DAZ1Q9NQZ3 744 aaKnown RBP3.11□□□□□ -1.91
HERC4-213ENST00000506515 CYB5R1Q9UHQ9 305 aa3.11□□□□□ -1.91
HERC4-213ENST00000506515 AMMECR1Q9Y4X0 333 aaPredicted RBP3.11□□□□□ -1.91
HERC4-213ENST00000506515 IGHV3OR15-7A0A075B7D8 119 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 IGKV1D-43A0A0B4J1Z2 117 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 NUPR2A6NF83 97 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 SMIM23A6NLE4 172 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 K7EN84 100 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 CXCR6O00574 342 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 NOS1APO75052 506 aaPredicted RBP3.1□□□□□ -1.91
HERC4-213ENST00000506515 HSD11B1P28845 292 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 SELENOWP63302 87 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 KLRD1Q13241 179 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 KRR1Q13601 381 aaKnown RBP3.1□□□□□ -1.91
HERC4-213ENST00000506515 CEACAM21Q3KPI0 293 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 CDNFQ49AH0 187 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 SMARCD3Q6STE5 483 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 ZNF826PQ6ZT77 177 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 SLC35E3Q7Z769 313 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 OR6V1Q8N148 313 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 FAM58AQ8N1B3 248 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 FAM216BQ8N7L0 139 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 ZNF676Q8N7Q3 588 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 ZNF565Q8N9K5 539 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 OR2T4Q8NH00 348 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 HAVCR2Q8TDQ0 301 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 SLC7A6Q92536 515 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 ZNF714Q96N38 554 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 GAFA1Q96PS6 74 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 DERL3Q96Q80 235 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 GPX7Q96SL4 187 aaPredicted RBP3.1□□□□□ -1.91
HERC4-213ENST00000506515 COPS4Q9BT78 406 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 TMED9Q9BVK6 235 aa3.1□□□□□ -1.91
HERC4-213ENST00000506515 MRPL20Q9BYC9 149 aaKnown RBP3.1□□□□□ -1.91
HERC4-213ENST00000506515 SND1-IT1Q9HBX3 110 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms