RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 KRTAP29-1A8MX34 341 aaPredicted RBP4.23□□□□□ -1.73
GYPB-204ENST00000504951 K7EQG2 157 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 GPR31O00270 319 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 ST8SIA3O43173 380 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 HLA-DMAP28067 261 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 HRH1P35367 487 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 CBX5P45973 191 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 TAS2R20P59543 309 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 NUTF2P61970 127 aaKnown RBP4.23□□□□□ -1.73
GYPB-204ENST00000504951 PRCDQ00LT1 54 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 ZNF767PQ75MW2 155 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 TBC1D26Q86UD7 250 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 ZNF114Q8NC26 417 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 OR5H2Q8NGV7 314 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 OR6F1Q8NGZ6 308 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 MRGPRFQ96AM1 343 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 TMEM56Q96MV1 263 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 CLUHP3Q96NS8 147 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 GINS3Q9BRX5 216 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 NIPSNAP3BQ9BS92 247 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 YTHDF1Q9BYJ9 559 aaKnown RBP4.23□□□□□ -1.73
GYPB-204ENST00000504951 TMEM231Q9H6L2 316 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 IFT46Q9NQC8 304 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 CLEC5AQ9NY25 188 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 DKK2Q9UBU2 259 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 PUS1Q9Y606 427 aaKnown RBP eCLIP4.23□□□□□ -1.73
GYPB-204ENST00000504951 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
GYPB-204ENST00000504951 A0A0B4J293 547 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 DNASE2O00115 360 aaPredicted RBP4.22□□□□□ -1.73
GYPB-204ENST00000504951 GNG7O60262 68 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 TMEM50AO95807 157 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 IGKV1-5P01602 117 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 EIF4EP06730 217 aaKnown RBP4.22□□□□□ -1.73
GYPB-204ENST00000504951 RPS19P39019 145 aaKnown RBP4.22□□□□□ -1.73
GYPB-204ENST00000504951 PPP5CP53041 499 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 HSPE1P61604 102 aaKnown RBP4.22□□□□□ -1.73
GYPB-204ENST00000504951 RPL11P62913 178 aaKnown RBP4.22□□□□□ -1.73
GYPB-204ENST00000504951 NEDD8Q15843 81 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 TMEM69Q5SWH9 247 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 Q5VSD8 79 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 H2BFWTQ7Z2G1 175 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 CMTM1Q8IZ96 169 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 SAMD12Q8N8I0 201 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 TSPAN14Q8NG11 270 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 OR4A16Q8NH70 328 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 DCANP1Q8TF63 244 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 FCGR1BQ92637 280 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 BORCS5Q969J3 196 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 ZNF503Q96F45 646 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 S100A16Q96FQ6 103 aaKnown RBP4.22□□□□□ -1.73
GYPB-204ENST00000504951 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 VCX3BQ9H321 246 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 FNDC4Q9H6D8 234 aaPredicted RBP4.22□□□□□ -1.73
GYPB-204ENST00000504951 FKBP11Q9NYL4 201 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 RABAC1Q9UI14 185 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 TMED3Q9Y3Q3 217 aa4.22□□□□□ -1.73
GYPB-204ENST00000504951 A0A0G2JRQ6 117 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 A0A1W2PS18 150 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 IGKV1-17P01599 117 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 ZNF688P0C7X2 276 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 P0C879 139 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 RNASE2P10153 161 aaKnown RBP4.21□□□□□ -1.74
GYPB-204ENST00000504951 PRSS3P35030 304 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 ETV6P41212 452 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 TAS2R46P59540 309 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 LSM3P62310 102 aaKnown RBP4.21□□□□□ -1.74
GYPB-204ENST00000504951 ACTL10Q5JWF8 245 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 UBE2NLQ5JXB2 153 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 GSG1LQ6UXU4 331 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 ZNF600Q6ZNG1 722 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 STXBP6Q8NFX7 210 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 GPX8Q8TED1 209 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 RAB40CQ96S21 281 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 TP53RKQ96S44 253 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 TSC22D3Q99576 134 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 PTTG2Q9NZH5 202 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 RFNGQ9Y644 331 aa4.21□□□□□ -1.74
GYPB-204ENST00000504951 M0QYG6 137 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 NPPCP23582 126 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 CRYBB3P26998 211 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 P2RY1P47900 373 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 AP2S1P53680 142 aaPredicted RBP4.2□□□□□ -1.74
GYPB-204ENST00000504951 CCL18P55774 89 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 DEFB1P60022 68 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 TSPAN5P62079 268 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 ERHP84090 104 aaKnown RBP4.2□□□□□ -1.74
GYPB-204ENST00000504951 SP6Q3SY56 376 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 TIGITQ495A1 244 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 TTC32Q5I0X7 151 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 TMEM88Q6PEY1 159 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 SNX29P2Q8IUI4 249 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 UPK3BQ9BT76 320 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 Q9H3A6 140 aa4.2□□□□□ -1.74
GYPB-204ENST00000504951 FAM212BQ9NTI7 297 aaPredicted RBP4.2□□□□□ -1.74
GYPB-204ENST00000504951 INS-IGF2F8WCM5 200 aa4.19□□□□□ -1.74
GYPB-204ENST00000504951 H3BMM0 161 aa4.19□□□□□ -1.74
GYPB-204ENST00000504951 CLN5O75503 358 aa4.19□□□□□ -1.74
GYPB-204ENST00000504951 ATP6V1G2O95670 118 aa4.19□□□□□ -1.74
GYPB-204ENST00000504951 ELK1P19419 428 aa4.19□□□□□ -1.74
GYPB-204ENST00000504951 SNCAP37840 140 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms