RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TMEM136Q6ZRR5 245 aa2.3□□□□□ -2.04
NEDD4-204ENST00000503468 LINC00696Q6ZRV3 163 aa2.3□□□□□ -2.04
NEDD4-204ENST00000503468 CPEB2Q7Z5Q1 589 aaKnown RBP2.3□□□□□ -2.04
NEDD4-204ENST00000503468 Q8N6K4 173 aa2.3□□□□□ -2.04
NEDD4-204ENST00000503468 ADOQ96SZ5 270 aa2.3□□□□□ -2.04
NEDD4-204ENST00000503468 NUDT22Q9BRQ3 303 aa2.3□□□□□ -2.04
NEDD4-204ENST00000503468 GTSF1LQ9H1H1 148 aa2.3□□□□□ -2.04
NEDD4-204ENST00000503468 INSIG2Q9Y5U4 225 aa2.3□□□□□ -2.04
NEDD4-204ENST00000503468 OR2T8A6NH00 312 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TNFSF11O14788 317 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 S100A7P31151 101 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 HBBP68871 147 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TCF15Q12870 199 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 RIGQ13278 110 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 GAGE13Q4V321 117 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TXNDC8Q6A555 127 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 SHISA6Q6ZSJ9 500 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TCF23Q7RTU1 214 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 HMGN2P46Q86SG4 172 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 ODF3L1Q8IXM7 274 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TMEM52Q8NDY8 209 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 OR10G6Q8NH81 332 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TSKUQ8WUA8 353 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 NAT6Q93015 286 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 HSD17B10Q99714 261 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 KLF13Q9Y2Y9 288 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 ROS1P08922 2347 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 PLECQ15149 4684 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 FLNAP21333 2647 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 MUC21A0A0G2JKD1 596 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 MUC21A0A140T8X8 626 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TEX48A0A1B0GUV7 120 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 LINC01619G3V211 115 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 H3BP45 60 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 H3BUT2 72 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 DLL1O00548 723 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 UTS2O95399 124 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 CELA2BP08218 269 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 RPS27P42677 84 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 RAB9AP51151 201 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 RBM11P57052 281 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 MUC21Q5SSG8 566 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 SLC25A48Q6ZT89 311 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 ANKRD37Q7Z713 158 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 RTN4RL2Q86UN3 420 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 SPACA3Q8IXA5 215 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 Q8N2B8 174 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 OR10J6PQ8NGY7 276 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 GTSF1Q8WW33 167 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 GPR82Q96P67 336 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 OXGR1Q96P68 337 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 ANAPC13Q9BS18 74 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 MPC1Q9Y5U8 109 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 ICE1Q9Y2F5 2266 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 A0A1W2PP11 408 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 FAM181BA6NEQ2 426 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 H3BML4 177 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 CHEK1O14757 476 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 IGHV3-7P01780 117 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 HLA-DRB4P13762 266 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 ZNF788Q6ZQV5 615 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 C6orf201Q7Z4U5 140 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 OCC1Q8TAD7 63 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 MBD6Q96DN6 1003 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 NPCDR1Q9BY65 106 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 GFRA4Q9GZZ7 299 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 ENY2Q9NPA8 101 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 HLA-DRB4X5D2U9 266 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 LRP1BQ9NZR2 4599 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 SMAD7O15105 426 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 CLDN14O95500 239 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 CA1P00915 261 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 GCHFRP30047 84 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 PAX9P55771 341 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 PMP22Q01453 160 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TTC32Q5I0X7 151 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 PIK3CD-AS1Q5SR53 167 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 SAMD5Q5TGI4 173 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 RNASEKQ6P5S7 137 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 C8orf86Q6ZUL3 223 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 DOLPP1Q86YN1 238 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TUSC5Q8IXB3 177 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 RPRMLQ8N4K4 120 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 BCORP1Q8N888 145 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 RAB1BQ9H0U4 201 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 HERC2O95714 4834 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TRAV8-6A0A0B4J262 113 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 CENPVL3A0A0U1RRI6 287 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 UBE2L5PA0A1B0GUS4 154 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 F2RL2O00254 374 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 FCN3O75636 299 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 COL8A2P25067 703 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 CLRN1P58418 232 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 FGF12P61328 243 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 UBE2L3P68036 154 aaKnown RBP2.29□□□□□ -2.04
NEDD4-204ENST00000503468 CLEC12BQ2HXU8 276 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 PAPPA-AS1Q5QFB9 102 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 TEPPQ6URK8 271 aa2.29□□□□□ -2.04
NEDD4-204ENST00000503468 OR1F12Q8NHA8 337 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms