RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ZNF705FA8MVS1 300 aaPredicted RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 IFNA17P01571 189 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 HNRNPCP07910 306 aaKnown RBP eCLIP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 ZNF705DP0CH99 300 aaPredicted RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 ZNF705BP0CI00 300 aaPredicted RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 C4BPBP20851 252 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 NPY1RP25929 384 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 OPRK1P41145 380 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 ETV6P41212 452 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 NKX2-1P43699 371 aaPredicted RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 FAM3BP58499 235 aaPredicted RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 MRPS10P82664 201 aaKnown RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 DHODHQ02127 395 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 C12orf74Q32Q52 190 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 RNF212Q495C1 297 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 RNASE10Q5GAN6 216 aaKnown RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 SAMD13Q5VXD3 122 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 PRSS54Q6PEW0 395 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 SLC24A4Q8NFF2 622 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 STXBP6Q8NFX7 210 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 Q8WTZ3 238 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 TMEM230Q96A57 120 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 RRNAD1Q96FB5 475 aaKnown RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 RAB40CQ96S21 281 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 NDUFAF3Q9BU61 184 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 TMEM222Q9H0R3 208 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 ENY2Q9NPA8 101 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 NRN1Q9NPD7 142 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 MRPL36Q9P0J6 103 aaKnown RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 COPZ2Q9P299 210 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 RABL2AQ9UBK7 228 aaPredicted RBP4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 PFDN2Q9UHV9 154 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 RABL2BQ9UNT1 228 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 TMEM56-RWDD3S4R434 201 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 MUC4Q99102 2169 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 PKHD1P08F94 4074 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 FAM90A26D6RGX4 464 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 H3BMM0 161 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 DEFB4AO15263 64 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 TNFAIP8O95379 198 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 TOMM40O96008 361 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 IGHV3-48P01763 117 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 ZNF688P0C7X2 276 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 HLA-DRB4P13762 266 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 ELK1P19419 428 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 TGFBR1P36897 503 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 RORCP51449 518 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 TAS2R19P59542 299 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 DHRS2Q13268 280 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 NMSQ5H8A3 153 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 ACTL10Q5JWF8 245 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 C1orf194Q5T5A4 169 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 OR8G2PQ6IF36 304 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 MZT2AQ6P582 158 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 SIGLEC15Q6ZMC9 328 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 Q6ZR54 194 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 Q6ZRM9 215 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 TMEM229BQ8NBD8 167 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 GLYATL2Q8WU03 294 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 AP3S1Q92572 193 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 RBPMSQ93062 196 aaKnown RBP4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 IL22RA2Q969J5 263 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 COMMD3Q9UBI1 195 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 KLK11Q9UBX7 282 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 U3KQ87 197 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 HLA-DRB4X5D2U9 266 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 DNAH11Q96DT5 4516 aa4.38□□□□□ -1.71
LSM3P4-201ENST00000502948 DYNC1H1Q14204 4646 aaKnown RBP4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 PKD1P98161 4303 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 IGHV3-66A0A0C4DH42 116 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 A0A0G2JRQ6 117 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 TEX13DA0A0J9YY54 714 aaPredicted RBP4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 PRSS29PA6NIE9 313 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 A8MTW9 85 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 GABARAPH6UMI1 98 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 RTL8CO15255 209 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 GABARAPO95166 117 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 CFDP00746 253 aaPredicted RBP4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 CD3DP04234 171 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 IL4P05112 153 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 SPART-AS1P0CW21 52 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 PGAM2P15259 253 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 ZNF182P17025 639 aaPredicted RBP4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 OR10J1P30954 320 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 GPX4P36969 197 aaPredicted RBP4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 ALDH3B2P48448 385 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 PSMB3P49720 205 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 PPP5CP53041 499 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 PAX9P55771 341 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 MEF2DQ14814 521 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 USF2Q15853 346 aaPredicted RBP4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 MLANAQ16655 118 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 IZUMO4Q1ZYL8 232 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 TRIM16LQ309B1 348 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 TIGITQ495A1 244 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 PSMG4Q5JS54 123 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 FOXI2Q6ZQN5 318 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 SNX29P2Q8IUI4 249 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 OR51G1Q8NGK1 321 aa4.37□□□□□ -1.71
LSM3P4-201ENST00000502948 RTBDNQ9BSG5 229 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms