RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 DMXL2Q8TDJ6 3036 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 PTPRZ1P23471 2315 aaPredicted RBP13.28□□□□□ -0.28
VCAN-204ENST00000502527 GRIFINA4D1Z8 144 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 MT-ND6P03923 174 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 CNTFRP26992 372 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 MFAP2P55001 183 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 DLX1P56177 255 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 ZNF672Q499Z4 452 aaPredicted RBP13.28□□□□□ -0.28
VCAN-204ENST00000502527 TMEM116Q8NCL8 245 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 ARFGEF3Q5TH69 2177 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 SPTBN2O15020 2390 aa13.27□□□□□ -0.28
VCAN-204ENST00000502527 PEX7O00628 323 aa13.27□□□□□ -0.28
VCAN-204ENST00000502527 PAX1P15863 534 aa13.27□□□□□ -0.28
VCAN-204ENST00000502527 ORM2P19652 201 aa13.27□□□□□ -0.28
VCAN-204ENST00000502527 PPP1R27Q86WC6 154 aa13.27□□□□□ -0.28
VCAN-204ENST00000502527 ST6GALNAC3Q8NDV1 305 aa13.27□□□□□ -0.28
VCAN-204ENST00000502527 C8orf46Q8TAG6 207 aa13.27□□□□□ -0.28
VCAN-204ENST00000502527 RPEQ96AT9 228 aa13.27□□□□□ -0.28
VCAN-204ENST00000502527 NOL4LQ96MY1 436 aaPredicted RBP13.27□□□□□ -0.28
VCAN-204ENST00000502527 SMG1Q96Q15 3661 aaKnown RBP13.27□□□□□ -0.29
VCAN-204ENST00000502527 SMIM27A0A1W2PRY6 76 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 NUPR1O60356 82 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 MOSP00540 346 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 COX7A1P24310 79 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 PAFAH1B2P68402 229 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 PAX2Q02962 417 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 ADGRG4Q8IZF6 3080 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 OR8B3Q8NGG8 313 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 OR1B1Q8NGR6 318 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 C14orf144Q96I85 54 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 MS4A10Q96PG2 267 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 OR8B2Q96RD0 313 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 SERTAD4Q9NUC0 356 aa13.27□□□□□ -0.29
VCAN-204ENST00000502527 ESDP10768 282 aa13.26□□□□□ -0.29
VCAN-204ENST00000502527 REC114Q7Z4M0 266 aa13.26□□□□□ -0.29
VCAN-204ENST00000502527 ZNF664Q8N3J9 261 aa13.26□□□□□ -0.29
VCAN-204ENST00000502527 LINC00479Q96M42 142 aa13.26□□□□□ -0.29
VCAN-204ENST00000502527 RNF5Q99942 180 aa13.26□□□□□ -0.29
VCAN-204ENST00000502527 MSRB2Q9Y3D2 182 aa13.26□□□□□ -0.29
VCAN-204ENST00000502527 F11RQ9Y624 299 aaKnown RBP13.26□□□□□ -0.29
VCAN-204ENST00000502527 CEP295Q9C0D2 2601 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 CCL21O00585 134 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 SIAH2O43255 324 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 HYPMO75409 117 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 FRMD6-AS1P0C7T7 363 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 GRNP28799 593 aaKnown RBP13.25□□□□□ -0.29
VCAN-204ENST00000502527 TPPP2P59282 170 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 PRB3Q04118 309 aaPredicted RBP13.25□□□□□ -0.29
VCAN-204ENST00000502527 Q0VG73 95 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 BAGE2Q86Y30 109 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 NAT8BQ9UHF3 227 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 TP53TG3Q9ULZ0 132 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 SCGB1D1O95968 90 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 APELAP0DMC3 54 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 MYCNOSP40205 109 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 TCL1AP56279 114 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 RANP62826 216 aaKnown RBP13.25□□□□□ -0.29
VCAN-204ENST00000502527 RUSC1-AS1Q66K80 236 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 BAGE3Q86Y29 109 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 KALRNO60229 2985 aa13.25□□□□□ -0.29
VCAN-204ENST00000502527 TEX22C9J3V5 150 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 SPINK4O60575 86 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 UCNP55089 124 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 RAB4BP61018 213 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 FAM231DQ6ZW35 169 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 NHLRC2Q8NBF2 726 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 NAV3Q8IVL0 2385 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 TLN1Q9Y490 2541 aaKnown RBP13.24□□□□□ -0.29
VCAN-204ENST00000502527 A8MWP6 167 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 LY6LH3BQJ8 138 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 AMY1AP04745 511 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 LIPFP07098 398 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 TMEM136Q6ZRR5 245 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 C19orf35Q6ZS72 473 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 ONECUT1Q9UBC0 465 aa13.24□□□□□ -0.29
VCAN-204ENST00000502527 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
VCAN-204ENST00000502527 SERF1AO75920 110 aa13.23□□□□□ -0.29
VCAN-204ENST00000502527 PLP1P60201 277 aa13.23□□□□□ -0.29
VCAN-204ENST00000502527 TMEM183BQ1AE95 376 aa13.23□□□□□ -0.29
VCAN-204ENST00000502527 LY6G5BQ8NDX9 201 aa13.23□□□□□ -0.29
VCAN-204ENST00000502527 RAB1BQ9H0U4 201 aa13.23□□□□□ -0.29
VCAN-204ENST00000502527 FBXL15Q9H469 300 aa13.23□□□□□ -0.29
VCAN-204ENST00000502527 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
VCAN-204ENST00000502527 POLEQ07864 2286 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 TRAV34A0A0B4J273 112 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 HLA-DQA1P01909 254 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 LINC00310P59036 64 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 UBE2G1P62253 170 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 BLNKQ8WV28 456 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 SRSF12Q8WXF0 261 aaKnown RBP13.22□□□□□ -0.29
VCAN-204ENST00000502527 CHRDL1Q9BU40 450 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 NAGKQ9UJ70 344 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 IGHV3-21A0A0B4J1V1 117 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 SLC25A5P05141 298 aaKnown RBP13.22□□□□□ -0.29
VCAN-204ENST00000502527 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 SLC35B1P78383 322 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 PLGLAQ15195 96 aa13.22□□□□□ -0.29
VCAN-204ENST00000502527 SRSF8Q9BRL6 282 aaKnown RBP13.22□□□□□ -0.29
VCAN-204ENST00000502527 KLRB1Q12918 225 aa13.21□□□□□ -0.29
VCAN-204ENST00000502527 MRPL54Q6P161 138 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms