RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	UQCC1	Q9NVA1	299 aa		4.22	□□□□□ -1.73
HMGXB4-208	ENST00000498325	C1RL	Q9NZP8	487 aa		4.22	□□□□□ -1.73
HMGXB4-208	ENST00000498325	KIAA1456	Q9P272	454 aa		4.22	□□□□□ -1.73
HMGXB4-208	ENST00000498325	METTL1	Q9UBP6	276 aa	Known RBP	4.22	□□□□□ -1.73
HMGXB4-208	ENST00000498325	HILPDA	Q9Y5L2	63 aa		4.22	□□□□□ -1.73
HMGXB4-208	ENST00000498325	CENPVL3	A0A0U1RRI6	287 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	C15orf62	A8K5M9	175 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	PMS2P5	A8MQ11	134 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	INS-IGF2	F8WCM5	200 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	UBE2C	O00762	179 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	RRH	O14718	337 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	NPFF	O15130	113 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SOX15	O60248	233 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	MPDU1	O75352	247 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	VENTX	O95231	258 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	IGLV2-23	P01705	113 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	PRH1	P02810	166 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	MT-ND4L	P03901	98 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	MSMB	P08118	114 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	FAM106CP	P0CH98	169 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	NPY1R	P25929	384 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	ATP6V0C	P27449	155 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	RPL27A	P46776	148 aa	Known RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	CAMLG	P49069	296 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	RAB2A	P61019	212 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SSBP2	P81877	361 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SERF2	P84101	59 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	PRB3	Q04118	309 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	LOXL1	Q08397	574 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	HABP2	Q14520	560 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SSX2	Q16385	188 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	TNXA	Q16473	311 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	PRSS8	Q16651	343 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	C2orf83	Q53S99	150 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SPINK9	Q5DT21	86 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	FAM74A1	Q5RGS3	127 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	AKR1C8P	Q5T2L2	129 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	IL17REL	Q6ZVW7	336 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	LHFPL4	Q7Z7J7	247 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	HAPLN4	Q86UW8	402 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	PPP1R27	Q86WC6	154 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SLC24A4	Q8NFF2	622 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	ZNF48	Q96MX3	618 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	OR4C12	Q96R67	309 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	TBX15	Q96SF7	602 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	PSMG3	Q9BT73	122 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	WDR61	Q9GZS3	305 aa	Known RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	OR51M1	Q9H341	326 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	NPVF	Q9HCQ7	196 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	TREM1	Q9NP99	234 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	PARP11	Q9NR21	331 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	NDUFA4L2	Q9NRX3	87 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SIGLEC9	Q9Y336	463 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	FBXO7	Q9Y3I1	522 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	TIMM9	Q9Y5J7	89 aa		4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
HMGXB4-208	ENST00000498325	MALRD1	Q5VYJ5	2156 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	IGHV1-69D	A0A0B4J2H0	117 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	FNDC10	F2Z333	226 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325		J3QLI3	93 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	CORT	O00230	105 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	NBR2	O15453	112 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	NDUFA3	O95167	84 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	CNIH1	O95406	144 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	CA2	P00918	260 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	IGKV1D-33	P01593	117 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	IGKV1-33	P01594	117 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	IGHV1-69	P01742	117 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	MB	P02144	154 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	OPN1MW	P04001	364 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	CRYBA1	P05813	215 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	FABP1	P07148	127 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	CRYGB	P07316	175 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	OPN1MW2	P0DN77	364 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	OPN1MW3	P0DN78	364 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	TMEM11	P17152	192 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	ADCYAP1	P18509	176 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	GPX4	P36969	197 aa	Predicted RBP	4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	BPIFB3	P59826	476 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	CD81	P60033	236 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SST	P61278	116 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	DLK1	P80370	383 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	ARL16	Q0P5N6	197 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	RAB31	Q13636	194 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	EBI3	Q14213	229 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	HNF4G	Q14541	408 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	MMD	Q15546	238 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	VWC2	Q2TAL6	325 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	DNLZ	Q5SXM8	178 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	LDLRAD2	Q5SZI1	272 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	DPPA3	Q6W0C5	159 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	NPB	Q8NG41	125 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	OR1L6	Q8NGR2	347 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	TAF15	Q92804	592 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SRSF8	Q9BRL6	282 aa	Known RBP	4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	SMDT1	Q9H4I9	107 aa		4.2	□□□□□ -1.74
HMGXB4-208	ENST00000498325	KCNIP2	Q9NS61	270 aa		4.2	□□□□□ -1.74

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