RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CEBPZOSA8MTT3 80 aa13.74□□□□□ -0.21
PRKCB-209ENST00000498058 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
PRKCB-209ENST00000498058 ADMP35318 185 aa13.74□□□□□ -0.21
PRKCB-209ENST00000498058 NKX2-1P43699 371 aaPredicted RBP13.74□□□□□ -0.21
PRKCB-209ENST00000498058 HOXA1P49639 335 aaPredicted RBP13.74□□□□□ -0.21
PRKCB-209ENST00000498058 TNFRSF9Q07011 255 aa13.74□□□□□ -0.21
PRKCB-209ENST00000498058 FCN2Q15485 313 aa13.74□□□□□ -0.21
PRKCB-209ENST00000498058 ODF3L2Q3SX64 289 aa13.74□□□□□ -0.21
PRKCB-209ENST00000498058 OR4D5Q8NGN0 318 aa13.74□□□□□ -0.21
PRKCB-209ENST00000498058 LINC00476Q8WZB0 136 aa13.74□□□□□ -0.21
PRKCB-209ENST00000498058 NMES1Q9C002 83 aa13.74□□□□□ -0.21
PRKCB-209ENST00000498058 K7EIM0 57 aa13.73□□□□□ -0.21
PRKCB-209ENST00000498058 TSPAN4O14817 238 aa13.73□□□□□ -0.21
PRKCB-209ENST00000498058 CYB5BO43169 146 aa13.73□□□□□ -0.21
PRKCB-209ENST00000498058 ZNF207O43670 478 aaKnown RBP13.73□□□□□ -0.21
PRKCB-209ENST00000498058 SIX6O95475 246 aa13.73□□□□□ -0.21
PRKCB-209ENST00000498058 SCGB1D2O95969 90 aa13.73□□□□□ -0.21
PRKCB-209ENST00000498058 ERHP84090 104 aaKnown RBP13.73□□□□□ -0.21
PRKCB-209ENST00000498058 PMS2P11Q13670 270 aa13.73□□□□□ -0.21
PRKCB-209ENST00000498058 WFDC3Q8IUB2 231 aa13.73□□□□□ -0.21
PRKCB-209ENST00000498058 SCARB1Q8WTV0 552 aa13.73□□□□□ -0.21
PRKCB-209ENST00000498058 CIB3Q96Q77 187 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-209ENST00000498058 SPAG8Q99932 426 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-209ENST00000498058 THYN1Q9P016 225 aa13.73□□□□□ -0.21
PRKCB-209ENST00000498058 F11RQ9Y624 299 aaKnown RBP13.73□□□□□ -0.21
PRKCB-209ENST00000498058 ID3Q02535 119 aa13.72□□□□□ -0.21
PRKCB-209ENST00000498058 DEFB135Q30KP9 77 aa13.72□□□□□ -0.21
PRKCB-209ENST00000498058 HEYLQ9NQ87 328 aaPredicted RBP13.72□□□□□ -0.21
PRKCB-209ENST00000498058 KMT2AQ03164 3969 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 INS-IGF2F8WCM5 200 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 SPRY2O43597 315 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 SYNGR2O43760 224 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 NXPH3O95157 252 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 PET100P0DJ07 73 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 H2BFSP57053 126 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 OR11H7Q8NGC8 314 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 DTD1Q8TEA8 209 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 BSCL2Q96G97 398 aaPredicted RBP13.71□□□□□ -0.21
PRKCB-209ENST00000498058 RBKSQ9H477 322 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 DAZ1Q9NQZ3 744 aaKnown RBP13.71□□□□□ -0.21
PRKCB-209ENST00000498058 C21orf62Q9NYP8 219 aa13.71□□□□□ -0.21
PRKCB-209ENST00000498058 FRAS1Q86XX4 4008 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 NDUFA4O00483 81 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 RLN2P04090 185 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 GIPP09681 153 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-209ENST00000498058 CXCL3P19876 107 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 PVALBP20472 110 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-209ENST00000498058 SNCAP37840 140 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 SUB1P53999 127 aaKnown RBP eCLIP13.7□□□□□ -0.22
PRKCB-209ENST00000498058 S100A10P60903 97 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 RPP30P78346 268 aaKnown RBP13.7□□□□□ -0.22
PRKCB-209ENST00000498058 SPINK9Q5DT21 86 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 Q6ZWC4 215 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 NOXA1Q86UR1 476 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 RAB40CQ96S21 281 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 C20orf24Q9BUV8 137 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 TP53TG1Q9Y2A0 90 aa13.7□□□□□ -0.22
PRKCB-209ENST00000498058 hCG_2014768A0A024R1R8 64 aa13.69□□□□□ -0.22
PRKCB-209ENST00000498058 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
PRKCB-209ENST00000498058 MBPP02686 304 aaPredicted RBP13.69□□□□□ -0.22
PRKCB-209ENST00000498058 CTSGP08311 255 aa13.69□□□□□ -0.22
PRKCB-209ENST00000498058 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
PRKCB-209ENST00000498058 ATP5IP56385 69 aaPredicted RBP13.69□□□□□ -0.22
PRKCB-209ENST00000498058 RAP2BP61225 183 aa13.69□□□□□ -0.22
PRKCB-209ENST00000498058 ZNF124Q15973 351 aa13.69□□□□□ -0.22
PRKCB-209ENST00000498058 SPSB3Q6PJ21 355 aa13.69□□□□□ -0.22
PRKCB-209ENST00000498058 UBAC2Q8NBM4 344 aa13.69□□□□□ -0.22
PRKCB-209ENST00000498058 MAGT1Q9H0U3 335 aa13.69□□□□□ -0.22
PRKCB-209ENST00000498058 LSM5Q9Y4Y9 91 aaKnown RBP13.69□□□□□ -0.22
PRKCB-209ENST00000498058 K7EMT4 169 aa13.68□□□□□ -0.22
PRKCB-209ENST00000498058 L7N2F9 121 aa13.68□□□□□ -0.22
PRKCB-209ENST00000498058 LY6G6CO95867 125 aa13.68□□□□□ -0.22
PRKCB-209ENST00000498058 HTR2BP41595 481 aa13.68□□□□□ -0.22
PRKCB-209ENST00000498058 POLR2GP62487 172 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRKCB-209ENST00000498058 VAMP2P63027 116 aa13.68□□□□□ -0.22
PRKCB-209ENST00000498058 FGL1Q08830 312 aa13.68□□□□□ -0.22
PRKCB-209ENST00000498058 IL15RAQ13261 267 aa13.68□□□□□ -0.22
PRKCB-209ENST00000498058 RNF183Q96D59 192 aa13.68□□□□□ -0.22
PRKCB-209ENST00000498058 U3KQ87 197 aa13.68□□□□□ -0.22
PRKCB-209ENST00000498058 SSSCA1O60232 199 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 FCGR2BP31994 310 aaPredicted RBP13.67□□□□□ -0.22
PRKCB-209ENST00000498058 BMI1P35226 326 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 BCAP31P51572 246 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 APOC4P55056 127 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 TAS2R30P59541 319 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 RAB32Q13637 225 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 Q56UQ5 140 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 APRG1Q8IVJ8 170 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 ZNF114Q8NC26 417 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 PPP1R1CQ8WVI7 109 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 RNF2Q99496 336 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 SMPXQ9UHP9 88 aa13.67□□□□□ -0.22
PRKCB-209ENST00000498058 IGHV3-49A0A0A0MS15 119 aa13.66□□□□□ -0.22
PRKCB-209ENST00000498058 I3L2K1 104 aa13.66□□□□□ -0.22
PRKCB-209ENST00000498058 K7EPK0 472 aa13.66□□□□□ -0.22
PRKCB-209ENST00000498058 IFNA10P01566 189 aa13.66□□□□□ -0.22
PRKCB-209ENST00000498058 IGHV3-48P01763 117 aa13.66□□□□□ -0.22
PRKCB-209ENST00000498058 IAPPP10997 89 aa13.66□□□□□ -0.22
PRKCB-209ENST00000498058 LAMTOR1Q6IAA8 161 aa13.66□□□□□ -0.22
PRKCB-209ENST00000498058 CEMP1Q6PRD7 247 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms