RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 HIST1H2BAQ96A08 127 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 PRO1933Q9H354 126 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 NCOR1P1Q9H4R4 102 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 IGLV3-9A0A075B6K5 115 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 INAFM1C9JVW0 142 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 M0R3E3 92 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 WISP2O76076 250 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 STAG3L2P0CL84 134 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 GATA4P43694 442 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 RAB9AP51151 201 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 ZNF137PP52743 207 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 PRSS22Q9GZN4 317 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 LINC00312Q9Y6C7 94 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 ATP5IP56385 69 aaPredicted RBP6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 ABHD12Q8N2K0 398 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 OR52E5Q8NH55 327 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 EAF1Q96JC9 268 aaPredicted RBP6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 PACRGQ96M98 296 aaPredicted RBP6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 PARD6GQ9BYG4 376 aaPredicted RBP6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 AURKAIP1Q9NWT8 199 aaPredicted RBP6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 TNRC6BQ9UPQ9 1833 aaKnown RBP6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 TMEM189A5PLL7 270 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 CXorf65A6NEN9 183 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 ITGB1BP1O14713 200 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 KBTBD11O94819 623 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 GCSHP23434 173 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 ICAM4Q14773 271 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 RRN3P1Q2M238 152 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 VKORC1L1Q8N0U8 176 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 WFDC11Q8NEX6 87 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 CLEC7AQ9BXN2 247 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 NPCDR1Q9BY65 106 aa6.59□□□□□ -1.36
HLA-DMB-262ENST00000498020 PGPA6NDG6 321 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 C9JQL5 133 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 MSMBP08118 114 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 FAM3BP58499 235 aaPredicted RBP6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 NCMAPQ5T1S8 102 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZNF738Q8NE65 137 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 OR8A1Q8NGG7 326 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 RFNGQ9Y644 331 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 TRAV20A0A0B4J274 112 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 LINC00473A8K010 186 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 TMEM250H0YL14 139 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 HTN3P15516 51 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 MEOX2P50222 304 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 DAZAP2Q15038 168 aaPredicted RBP6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 SPSB3Q6PJ21 355 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 SYT8Q8NBV8 401 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 SPTBN5Q9NRC6 3674 aaKnown RBP6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 A6NDN8 102 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 E7EQL1 145 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 SIAH2O43255 324 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 IGHV3-11P01762 117 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 RNF224P0DH78 156 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 SEM1Q6ZVN7 128 aa6.58□□□□□ -1.36
HLA-DMB-262ENST00000498020 NDUFB4O95168 129 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 CD55P08174 381 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 SNRPCP09234 159 aaKnown RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 OR9G9P0C7N8 305 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 C8orf88P0DMB2 117 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 SELLP14151 372 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 RPL24P83731 157 aaKnown RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 ADORA2A-AS1P86434 159 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 C19orf54Q5BKX5 351 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 TMEM219Q86XT9 240 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 OR51G1Q8NGK1 321 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 DNAJC4Q9NNZ3 241 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 C15orf65H3BRN8 121 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 VDAC2P45880 294 aaPredicted RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 LBHQ53QV2 105 aaPredicted RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 IBA57Q5T440 356 aaKnown RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 AMMECR1LQ6DCA0 310 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 OR4A47Q6IF82 309 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZNF841Q6ZN19 808 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 OR1N2Q8NGR9 330 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 C11orf1Q9H5F2 150 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 PLA2G2EQ9NZK7 142 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 RPUSD1Q9UJJ7 312 aaKnown RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 UNC79Q9P2D8 2635 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 A0A087WWC5 75 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 SAA2-SAA4A0A096LPE2 208 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 H3BUX3 64 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 SAA2P0DJI9 122 aaPredicted RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 OR4B1Q8NGF8 309 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 OSR1Q8TAX0 266 aaPredicted RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZMAT5Q9UDW3 170 aaKnown RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 IFITM10A6NMD0 228 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 SMIM6P0DI80 62 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 COL8A2P25067 703 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 FCGR2BP31994 310 aaPredicted RBP6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 MIC13Q5XKP0 118 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 RAX2Q96IS3 184 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 C19orf24Q9BVV8 132 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 WDR83OSQ9Y284 106 aa6.57□□□□□ -1.36
HLA-DMB-262ENST00000498020 A0A087X0M5 115 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 A0A1B0GX30 115 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 C15orf61A6NNL5 157 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 HLA-DQA1P01909 254 aa6.56□□□□□ -1.36
HLA-DMB-262ENST00000498020 TSPOP30536 169 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms