RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 RBMXL1Q96E39 390 aaKnown RBP6.77□□□□□ -1.32
U2AF1-212ENST00000496462 GPR82Q96P67 336 aa6.77□□□□□ -1.32
U2AF1-212ENST00000496462 ATP5SQ99766 215 aa6.77□□□□□ -1.32
U2AF1-212ENST00000496462 IGLV2-14P01704 120 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 RNASE2P10153 161 aaKnown RBP6.77□□□□□ -1.33
U2AF1-212ENST00000496462 ELLP55199 621 aaPredicted RBP6.77□□□□□ -1.33
U2AF1-212ENST00000496462 EIF4EBP1Q13541 118 aaPredicted RBP6.77□□□□□ -1.33
U2AF1-212ENST00000496462 KRTAP24-1Q3LI83 254 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 LDLRAD2Q5SZI1 272 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 LCN12Q6JVE5 192 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 TMEM144Q7Z5S9 345 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 GTSCR1Q86UQ5 136 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 OR4X1Q8NH49 305 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 C5orf30Q96GV9 206 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 RITA1Q96K30 269 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 ELOA3CA0A087WX78 387 aaPredicted RBP6.77□□□□□ -1.33
U2AF1-212ENST00000496462 TRAV14DV4A0A0A6YYC5 116 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 OR2T8A6NH00 312 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 SEC14L6B5MCN3 397 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 IGKV1-39P01597 117 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 IGKV1D-39P04432 117 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 CD28P10747 220 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 ORM2P19652 201 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 EWSR1Q01844 656 aaKnown RBP eCLIP6.77□□□□□ -1.33
U2AF1-212ENST00000496462 OR4D5Q8NGN0 318 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 SPATA3Q8NHX4 192 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 WDR89Q96FK6 387 aaPredicted RBP6.77□□□□□ -1.33
U2AF1-212ENST00000496462 HSPB11Q9Y547 144 aa6.77□□□□□ -1.33
U2AF1-212ENST00000496462 IGLC7A0M8Q6 106 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 NDUFA4O00483 81 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 NDUFB8O95169 186 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 SPNP16150 400 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 RPL7P18124 248 aaKnown RBP6.76□□□□□ -1.33
U2AF1-212ENST00000496462 KRTAP21-3Q3LHN1 58 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 Q6ZNX1 250 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 ZNF491Q8N8L2 437 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 OR1B1Q8NGR6 318 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 RCC1LQ96I51 464 aaKnown RBP6.76□□□□□ -1.33
U2AF1-212ENST00000496462 K7EQM0 130 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 RHOBP62745 196 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 ACTR3CQ9C0K3 210 aaPredicted RBP6.76□□□□□ -1.33
U2AF1-212ENST00000496462 TECRQ9NZ01 308 aaKnown RBP6.76□□□□□ -1.33
U2AF1-212ENST00000496462 BRI3O95415 125 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 IGHV3-23P01764 117 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 PROK1P58294 105 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 C10orf113Q5VZT2 155 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 SCARB1Q8WTV0 552 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 AAMDCQ9H7C9 122 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 TUBA4BQ9H853 241 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 DAZ1Q9NQZ3 744 aaKnown RBP6.76□□□□□ -1.33
U2AF1-212ENST00000496462 IL4P05112 153 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 PRR31Q5SQ13 230 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 CMTM2Q8TAZ6 248 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 SERTAD4Q9NUC0 356 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 TIMM9Q9Y5J7 89 aa6.76□□□□□ -1.33
U2AF1-212ENST00000496462 PITX3O75364 302 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 OR2C1O95371 312 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 SNRPD3P62318 126 aaKnown RBP6.75□□□□□ -1.33
U2AF1-212ENST00000496462 WT1-ASQ06250 92 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 CYP2G1PQ6ZSU1 146 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 SLC39A9Q9NUM3 307 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 CLEC5AQ9NY25 188 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 MRPL27Q9P0M9 148 aaKnown RBP6.75□□□□□ -1.33
U2AF1-212ENST00000496462 SLC45A2Q9UMX9 530 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 IGLV11-55A0A075B6I3 123 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 F6UZH7 168 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 BOLA2-SMG1P6H3BVE0 249 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 HBE1P02100 147 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 LINC00869P0C866 280 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 PPT1P50897 306 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 YPEL3P61236 119 aaPredicted RBP6.75□□□□□ -1.33
U2AF1-212ENST00000496462 B2MP61769 119 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 HSD17B11Q8NBQ5 300 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 TRGV9Q99603 122 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 SYNJ2BPP57105 145 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 TMEM116Q8NCL8 245 aa6.75□□□□□ -1.33
U2AF1-212ENST00000496462 PUS1Q9Y606 427 aaKnown RBP eCLIP6.75□□□□□ -1.33
U2AF1-212ENST00000496462 TEX22C9J3V5 150 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 ZNF343Q6P1L6 599 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 BPIFA4PQ86YQ2 179 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 CYYR1Q96J86 154 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 S4R3C0 116 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.74□□□□□ -1.33
U2AF1-212ENST00000496462 HMSDA8MTL9 139 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 Q6ZRM9 215 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 OR2G3Q8NGZ4 309 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 GATAD1Q8WUU5 269 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 A0A0G2JRQ6 117 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 DBX1A6NMT0 343 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 UMAD1C9J7I0 102 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 HOXD3P31249 432 aaPredicted RBP6.74□□□□□ -1.33
U2AF1-212ENST00000496462 BLOC1S1P78537 153 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 NDPQ00604 133 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 TIGITQ495A1 244 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 OR2K2Q8NGT1 345 aa6.74□□□□□ -1.33
U2AF1-212ENST00000496462 FBN1P35555 2871 aaKnown RBP6.74□□□□□ -1.33
U2AF1-212ENST00000496462 MGAM2Q2M2H8 2515 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 IFNA7P01567 189 aa6.73□□□□□ -1.33
U2AF1-212ENST00000496462 PSMB8P28062 276 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms