RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SNRNP40Q96DI7 357 aaKnown RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 PLEKHA3Q9HB20 300 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 TNRC6AQ8NDV7 1962 aaKnown RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 FOXH1O75593 365 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 IGFBP2P18065 325 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 VDAC2P45880 294 aaPredicted RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 CSN1S1P47710 185 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 RPS16P62249 146 aaKnown RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 CACNA1BQ00975 2339 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 NRN1LQ496H8 165 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 SPATA31B1PQ5VZV4 182 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 TTC9CQ8N5M4 171 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 NFAM1Q8NET5 270 aaPredicted RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 GTSF1Q8WW33 167 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 FAM168AQ92567 244 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 HSD17B10Q99714 261 aaKnown RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 CYSLTR1Q9Y271 337 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 ZFYVE26Q68DK2 2539 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 SMG1Q96Q15 3661 aaKnown RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 PRRC2CQ9Y520 2896 aaKnown RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 TRGV8A0A0C4DH27 118 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 IGHV3-20A0A0C4DH32 117 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 SH2D7A6NKC9 451 aaPredicted RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 HIGD1CA8MV81 97 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 RPL30P62888 115 aaKnown RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 GUSBP1Q15486 140 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 ZNF502Q8TBZ5 544 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 SPACA9Q96E40 222 aaPredicted RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 GPR82Q96P67 336 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 GFRA4Q9GZZ7 299 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 ZNF355PQ9NSJ1 428 aa7.42□□□□□ -1.22
HPS4-217ENST00000496385 hADV38S2A0JD32 116 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 H0Y8G0 127 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 KLF7O75840 302 aaPredicted RBP7.41□□□□□ -1.22
HPS4-217ENST00000496385 CT45A10P0DMU9 189 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 GPR12P47775 334 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 PRSS12P56730 875 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
HPS4-217ENST00000496385 LGALS9BQ3B8N2 356 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 LGALS9CQ6DKI2 356 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 Q6P435 159 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 Q6ZS92 163 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 ANKRD37Q7Z713 158 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 OR10D3Q8NH80 312 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 PIFOQ8TCI5 191 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 ZNF747Q9BV97 191 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 FGF23Q9GZV9 251 aaPredicted RBP7.41□□□□□ -1.22
HPS4-217ENST00000496385 HIGD1BQ9P298 99 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 C17orf98A8MV24 154 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 A8MWL6 223 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 GGTLC3B5MD39 225 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 CAMPP49913 170 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 BRWD1-AS2P59051 145 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 Q8IYB0 196 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 SSMEM1Q8WWF3 244 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 ABHD17AQ96GS6 310 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 C1orf159Q96HA4 380 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 SPAG8Q99932 426 aaPredicted RBP7.41□□□□□ -1.22
HPS4-217ENST00000496385 SSBP3Q9BWW4 388 aaPredicted RBP7.41□□□□□ -1.22
HPS4-217ENST00000496385 RTTNQ86VV8 2226 aa7.41□□□□□ -1.22
HPS4-217ENST00000496385 CA1P00915 261 aaPredicted RBP7.4□□□□□ -1.22
HPS4-217ENST00000496385 MRPL14Q6P1L8 145 aaKnown RBP7.4□□□□□ -1.22
HPS4-217ENST00000496385 C16orf47Q6ZP98 133 aaPredicted RBP7.4□□□□□ -1.22
HPS4-217ENST00000496385 MIR17HGQ75NE6 70 aa7.4□□□□□ -1.22
HPS4-217ENST00000496385 ZADH2Q8N4Q0 377 aa7.4□□□□□ -1.22
HPS4-217ENST00000496385 ZNF837Q96EG3 531 aaPredicted RBP7.4□□□□□ -1.22
HPS4-217ENST00000496385 FOXB1Q99853 325 aa7.4□□□□□ -1.22
HPS4-217ENST00000496385 MRPL32Q9BYC8 188 aaKnown RBP7.4□□□□□ -1.22
HPS4-217ENST00000496385 ERG28Q9UKR5 140 aa7.4□□□□□ -1.22
HPS4-217ENST00000496385 MPC1Q9Y5U8 109 aa7.4□□□□□ -1.22
HPS4-217ENST00000496385 PCSK5Q92824 1860 aa7.4□□□□□ -1.22
HPS4-217ENST00000496385 MED13Q9UHV7 2174 aa7.4□□□□□ -1.22
HPS4-217ENST00000496385 ATRXP46100 2492 aa7.4□□□□□ -1.22
HPS4-217ENST00000496385 VWC2LB2RUY7 222 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 SYNGR1O43759 233 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 FOLR3P41439 243 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 GNG3P63215 75 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 PRAMEF5Q5TYX0 476 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 PRAMEF6Q5VXH4 476 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 C1orf122Q6ZSJ8 110 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 NEU4Q8WWR8 484 aaPredicted RBP7.4□□□□□ -1.23
HPS4-217ENST00000496385 RAB37Q96AX2 223 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 GALMQ96C23 342 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 FAM110AQ9BQ89 295 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 GCM1Q9NP62 436 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 DKK4Q9UBT3 224 aa7.4□□□□□ -1.23
HPS4-217ENST00000496385 SPENQ96T58 3664 aaKnown RBP7.39□□□□□ -1.23
HPS4-217ENST00000496385 A0A1W2PRD5 423 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 A0A1W2PRF3 423 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 A0A1W2PRM7 423 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 DUTP33316 252 aaKnown RBP7.39□□□□□ -1.23
HPS4-217ENST00000496385 PLGLB1Q02325 96 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 ATP6V0E2Q8NHE4 81 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 NABP2Q9BQ15 211 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 VCX2Q9H322 139 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 SPANXA1Q9NS26 97 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 HILPDAQ9Y5L2 63 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 NCKAP5O14513 1909 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 KALRNO60229 2985 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms