RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 RPL27AP46776 148 aaKnown RBP8.27□□□□□ -1.09
SAMM50-206ENST00000494795 COMPP49747 757 aaPredicted RBP8.27□□□□□ -1.09
SAMM50-206ENST00000494795 NDPQ00604 133 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 PMS2P11Q13670 270 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 HES1Q14469 280 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 PLGLAQ15195 96 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 FAM71F2Q6NXP2 309 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 NHLRC2Q8NBF2 726 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 SRSF12Q8WXF0 261 aaKnown RBP8.27□□□□□ -1.09
SAMM50-206ENST00000494795 TIMD4Q96H15 378 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 FAM167A-AS1Q96KT0 104 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 PFDN5Q99471 154 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 GSN-AS1Q9NRJ2 163 aa8.27□□□□□ -1.09
SAMM50-206ENST00000494795 A0A1B0GV90 55 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 IFITM10A6NMD0 228 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 TMEM250H0YL14 139 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 ORM2P19652 201 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 CRYBB3P26998 211 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 RAB5BP61020 215 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 RHOBP62745 196 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 C1QL4Q86Z23 238 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 OCC1Q8TAD7 63 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 VSTM2AQ8TAG5 236 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 FUT9Q9Y231 359 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 HTR1DP28221 377 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 FRZBQ92765 325 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 CSPG4Q6UVK1 2322 aa8.26□□□□□ -1.09
SAMM50-206ENST00000494795 A6NNC1 897 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 CLDN34H7C241 214 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 SLC17A3O00476 420 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 FSTL3O95633 263 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 MAS1LP35410 378 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 LGALS7P47929 136 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 DEFA6Q01524 100 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 PRR31Q5SQ13 230 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 FAM210BQ96KR6 192 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.09
SAMM50-206ENST00000494795 A0A1W2PPQ1 181 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST1H2BKO60814 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 LY86O95711 162 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 MT-CO2P00403 227 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 IGHV3-23P01764 117 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST1H2BJP06899 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 PFN1P07737 140 aaKnown RBP8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HOXB4P17483 251 aaPredicted RBP8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST1H2BOP23527 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 IL3RAP26951 378 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST1H2BBP33778 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST1H2BDP58876 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST1H2BCP62807 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST2H2BEQ16778 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.25□□□□□ -1.09
SAMM50-206ENST00000494795 OR4X1Q8NH49 305 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST1H2BHQ93079 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 SLC35E1Q96K37 410 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST1H2BNQ99877 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 HIST1H2BMQ99879 126 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 ZNF355PQ9NSJ1 428 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 DPM3Q9P2X0 92 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 PTPN13Q12923 2485 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 A0A1W2PN81 502 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 ODF3BA8MYP8 253 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 CLN5O75503 358 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 IGHV2-5P01817 119 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 IGHV4-39P01824 125 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 OR5G3P0C626 314 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 SUMO1P63165 101 aaKnown RBP8.25□□□□□ -1.09
SAMM50-206ENST00000494795 RAB31Q13636 194 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 TEX45Q8NA69 505 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 NEU4Q8WWR8 484 aaPredicted RBP8.25□□□□□ -1.09
SAMM50-206ENST00000494795 AJUBAQ96IF1 538 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 BIN3Q9NQY0 253 aa8.25□□□□□ -1.09
SAMM50-206ENST00000494795 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 PHOX2AO14813 284 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 NDUFA6P56556 154 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 PAX2Q02962 417 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 OR5AU1Q8NGC0 362 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 OR11H6Q8NGC7 330 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 OR1B1Q8NGR6 318 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 OR4A5Q8NH83 315 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 ASCL2Q99929 193 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 WNT10AQ9GZT5 417 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 KCNIP2Q9NS61 270 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 TRAV34A0A0B4J273 112 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 CNIH1O95406 144 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 PRTN3P24158 256 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 LMO4P61968 165 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 PNRC1Q12796 327 aaPredicted RBP8.24□□□□□ -1.09
SAMM50-206ENST00000494795 CDPF1Q6NVV7 123 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 MMD2Q8IY49 270 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 IGHV3OR16-8A0A075B7F1 116 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 LINC01548A6NM66 108 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 NCBP2LA6PVI3 153 aaKnown RBP8.24□□□□□ -1.09
SAMM50-206ENST00000494795 RPLP1P05386 114 aaKnown RBP8.24□□□□□ -1.09
SAMM50-206ENST00000494795 TRGC1P0CF51 173 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 GALR1P47211 349 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 GNG5P63218 68 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 C16orf54Q6UWD8 224 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 TNFRSF19Q9NS68 423 aa8.24□□□□□ -1.09
SAMM50-206ENST00000494795 KLF2Q9Y5W3 355 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 1235.5 ms