RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SYS1-DBNDD2H3BUS1 97 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 OVOL3O00110 214 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 SAA1P0DJI8 122 aaPredicted RBP12.41□□□□□ -0.42
SDF4-207ENST00000494748 OR4C5Q8NGB2 326 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 MLST8Q9BVC4 326 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 CGB1A6NKQ9 187 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 ATP5IP56385 69 aaPredicted RBP12.41□□□□□ -0.42
SDF4-207ENST00000494748 C1orf162Q8NEQ5 155 aaPredicted RBP12.41□□□□□ -0.42
SDF4-207ENST00000494748 PRSS22Q9GZN4 317 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 CFAP47Q6ZTR5 3102 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 TMEM265A0A087WTH1 108 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 CD46P15529 392 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 TCF24Q7RTU0 167 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 PRO3102Q9H379 93 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 FNDC4Q9H6D8 234 aaPredicted RBP12.41□□□□□ -0.42
SDF4-207ENST00000494748 LINC00574Q9H8X3 128 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 NDUFA4L2Q9NRX3 87 aa12.41□□□□□ -0.42
SDF4-207ENST00000494748 PRR27Q6MZM9 219 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 DEFB125Q8N687 156 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 PPP1R35Q8TAP8 253 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 PAXXQ9BUH6 204 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 MRPL36Q9P0J6 103 aaKnown RBP12.4□□□□□ -0.42
SDF4-207ENST00000494748 KLF12Q9Y4X4 402 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 TECTAO75443 2155 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 REG1BP48304 166 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 RPS20P60866 119 aaKnown RBP12.4□□□□□ -0.42
SDF4-207ENST00000494748 FOXE3Q13461 319 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 COTL1Q14019 142 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 SCRT2Q9NQ03 307 aa12.4□□□□□ -0.42
SDF4-207ENST00000494748 OR2T8A6NH00 312 aa12.4□□□□□ -0.43
SDF4-207ENST00000494748 ATP1A1-AS1Q5TC04 95 aa12.4□□□□□ -0.43
SDF4-207ENST00000494748 MOGAT3Q86VF5 341 aa12.4□□□□□ -0.43
SDF4-207ENST00000494748 FAM222BQ8WU58 562 aa12.4□□□□□ -0.43
SDF4-207ENST00000494748 CACNG8Q8WXS5 425 aa12.4□□□□□ -0.43
SDF4-207ENST00000494748 NBASA2RRP1 2371 aa12.39□□□□□ -0.43
SDF4-207ENST00000494748 EP300Q09472 2414 aaPredicted RBP12.39□□□□□ -0.43
SDF4-207ENST00000494748 C9orf106Q8NAJ2 232 aa12.39□□□□□ -0.43
SDF4-207ENST00000494748 HIST1H1EP10412 219 aaKnown RBP12.39□□□□□ -0.43
SDF4-207ENST00000494748 RUSC1-AS1Q66K80 236 aa12.39□□□□□ -0.43
SDF4-207ENST00000494748 SLC25A48Q6ZT89 311 aaKnown RBP12.39□□□□□ -0.43
SDF4-207ENST00000494748 PTPRZ1P23471 2315 aaPredicted RBP12.39□□□□□ -0.43
SDF4-207ENST00000494748 C19orf71A6NCJ1 209 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 DLL1O00548 723 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 FOXA3P55318 350 aaPredicted RBP12.38□□□□□ -0.43
SDF4-207ENST00000494748 CNEP1R1Q8N9A8 125 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 MUC21A0A0G2JKD1 596 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 MUC21A0A140T8X8 626 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 INS-IGF2F8WCM5 200 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 HBBP68871 147 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 MUC21Q5SSG8 566 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 CHCHD1Q96BP2 118 aaKnown RBP12.38□□□□□ -0.43
SDF4-207ENST00000494748 DKK4Q9UBT3 224 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 NUDT3O95989 172 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 PSG1P11464 419 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 VAMP3Q15836 100 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 SGK494Q96LW2 274 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 CST9LQ9H4G1 147 aa12.38□□□□□ -0.43
SDF4-207ENST00000494748 C10orf113Q5VZT2 155 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 SPTA1P02549 2419 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 IGHG3P01860 377 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 WT1-ASQ06250 92 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 MZT1Q08AG7 82 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 THAP8Q8NA92 274 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 ITLN1Q8WWA0 313 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 EPDR1Q9UM22 224 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 WASHC3Q9Y3C0 194 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 COX7A2P2O60397 106 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 MOSP00540 346 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 CHRDL1Q9BU40 450 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 RPP21Q9H633 154 aaKnown RBP12.37□□□□□ -0.43
SDF4-207ENST00000494748 PLCE1Q9P212 2302 aa12.37□□□□□ -0.43
SDF4-207ENST00000494748 TCRBV4S1A1TA0A5B7 111 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 HOXC12P31275 282 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 RNF151Q2KHN1 245 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 SMIM12Q96EX1 92 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 GAFA1Q96PS6 74 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 HLA-DRB1P01911 266 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 APOHP02749 345 aaPredicted RBP12.36□□□□□ -0.43
SDF4-207ENST00000494748 CADP27708 2225 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 OCIAD2Q56VL3 154 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 ZNF833PQ6ZTB9 187 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 IGHV3-48P01763 117 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 LDLRAD2Q5SZI1 272 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 Q71RC1 249 aaPredicted RBP12.36□□□□□ -0.43
SDF4-207ENST00000494748 RND1Q92730 232 aa12.36□□□□□ -0.43
SDF4-207ENST00000494748 MCRIP2Q9BUT9 160 aaKnown RBP12.36□□□□□ -0.43
SDF4-207ENST00000494748 RPUSD1Q9UJJ7 312 aaKnown RBP12.36□□□□□ -0.43
SDF4-207ENST00000494748 PLAUP00749 431 aa12.35□□□□□ -0.43
SDF4-207ENST00000494748 CT83Q5H943 113 aa12.35□□□□□ -0.43
SDF4-207ENST00000494748 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
SDF4-207ENST00000494748 LTAP01374 205 aa12.35□□□□□ -0.43
SDF4-207ENST00000494748 SLC25A34Q6PIV7 304 aa12.35□□□□□ -0.43
SDF4-207ENST00000494748 NPIPB3Q92617 1050 aa12.35□□□□□ -0.43
SDF4-207ENST00000494748 ZNF71Q9NQZ8 489 aaPredicted RBP12.35□□□□□ -0.43
SDF4-207ENST00000494748 RNF24Q9Y225 148 aa12.35□□□□□ -0.43
SDF4-207ENST00000494748 LEPROTL1O95214 131 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 C2orf91Q6ZV80 131 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 LHFPL4Q7Z7J7 247 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 SLC25A15Q9Y619 301 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 AKAP6Q13023 2319 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms