RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 TTTY13Q9BZ97 58 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 CXCL16Q9H2A7 254 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 PSTPIP2Q9H939 334 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 CEP250Q9BV73 2442 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 SPAG17Q6Q759 2223 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 CITO14578 2027 aa2.87□□□□□ -1.95
SMC2-205ENST00000493955 CHP2O43745 196 aa2.87□□□□□ -1.95
SMC2-205ENST00000493955 RPL30P62888 115 aaKnown RBP2.87□□□□□ -1.95
SMC2-205ENST00000493955 CCL7P80098 99 aa2.87□□□□□ -1.95
SMC2-205ENST00000493955 ACOT6Q3I5F7 207 aaPredicted RBP2.87□□□□□ -1.95
SMC2-205ENST00000493955 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SMC2-205ENST00000493955 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SMC2-205ENST00000493955 ZNF675Q8TD23 568 aa2.87□□□□□ -1.95
SMC2-205ENST00000493955 CHMP6Q96FZ7 201 aa2.87□□□□□ -1.95
SMC2-205ENST00000493955 ZFHX4Q86UP3 3567 aa2.87□□□□□ -1.95
SMC2-205ENST00000493955 NCOR2Q9Y618 2525 aa2.87□□□□□ -1.95
SMC2-205ENST00000493955 HELZP42694 1942 aaKnown RBP2.87□□□□□ -1.95
SMC2-205ENST00000493955 MYH11P35749 1972 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 EP300Q09472 2414 aaPredicted RBP2.86□□□□□ -1.95
SMC2-205ENST00000493955 TMEM269A0A1B0GVZ9 245 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 ZNF189O75820 626 aaPredicted RBP2.86□□□□□ -1.95
SMC2-205ENST00000493955 UCHL1P09936 223 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 KRTAP10-1P60331 282 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 SRSF6Q13247 344 aaKnown RBP2.86□□□□□ -1.95
SMC2-205ENST00000493955 TBC1D19Q8N5T2 526 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 ZNF337Q9Y3M9 751 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 SPTBN2O15020 2390 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 TCHHQ07283 1943 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 CEP192Q8TEP8 1941 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 USP24Q9UPU5 2620 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 ZNF292O60281 2723 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 ANAPC1Q9H1A4 1944 aa2.86□□□□□ -1.95
SMC2-205ENST00000493955 MUC21A0A0G2JKD1 596 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 MUC21A0A140T8X8 626 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 KNCNA6PVL3 124 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 J3QRE1 110 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 PSMD12O00232 456 aaPredicted RBP2.85□□□□□ -1.95
SMC2-205ENST00000493955 CCL16O15467 120 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 ATP5HO75947 161 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 HAAOP46952 286 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 PSME3P61289 254 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 AKR1C1Q04828 323 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 ZNF181Q2M3W8 571 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 SLC35F6Q8N357 371 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 OR4X1Q8NH49 305 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 TCEAL4Q96EI5 215 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 DCUN1D1Q96GG9 259 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 MPDZO75970 2070 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 FRYLO94915 3013 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 COL5A1P20908 1838 aaPredicted RBP2.85□□□□□ -1.95
SMC2-205ENST00000493955 ARL5CA6NH57 179 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 C2orf74A8MZ97 194 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 BHLHE40O14503 412 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 HOXA6P31267 233 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 CCR2P41597 374 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 RAB13P51153 203 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 REEP5Q00765 189 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 MIAQ16674 131 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 GLT8D1Q68CQ7 371 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 AGTRAPQ6RW13 159 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 Q6ZS52 159 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 SSX8Q7RTT4 187 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 C20orf196Q8IYI0 205 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 PRAP1Q96NZ9 151 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 PPP1R2P1Q96PQ5 205 aa2.85□□□□□ -1.95
SMC2-205ENST00000493955 CFAP47Q6ZTR5 3102 aa2.84□□□□□ -1.95
SMC2-205ENST00000493955 PTPRBP23467 1997 aa2.84□□□□□ -1.95
SMC2-205ENST00000493955 PLXND1Q9Y4D7 1925 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 TRGV5A0A0B4J1U4 118 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 NSA2O95478 260 aaKnown RBP2.84□□□□□ -1.96
SMC2-205ENST00000493955 SRP19P09132 144 aaKnown RBP2.84□□□□□ -1.96
SMC2-205ENST00000493955 OR4D2P58180 307 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 AP1S1P61966 158 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 CTAG1AP78358 180 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 GUK1Q16774 197 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 LHFPL1Q86WI0 220 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 KLK6Q92876 244 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 DNAJC30Q96LL9 226 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 XAGE1AQ9HD64 81 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 CMTM6Q9NX76 183 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 RSL24D1Q9UHA3 163 aaKnown RBP2.84□□□□□ -1.96
SMC2-205ENST00000493955 PKIGQ9Y2B9 76 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 PCDH15Q96QU1 1955 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 SDK1Q7Z5N4 2213 aa2.84□□□□□ -1.96
SMC2-205ENST00000493955 TPRP12270 2363 aaKnown RBP2.83□□□□□ -1.96
SMC2-205ENST00000493955 FRYQ5TBA9 3013 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 MYOFQ9NZM1 2061 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 BAHCC1Q9P281 2608 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 SMIM9A6NGZ8 99 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 FNDC10F2Z333 226 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 I3L521 148 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 IFNA6P05013 189 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 BPGMP07738 259 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 ZNF705DP0CH99 300 aaPredicted RBP2.83□□□□□ -1.96
SMC2-205ENST00000493955 HIST1H1TP22492 207 aaPredicted RBP2.83□□□□□ -1.96
SMC2-205ENST00000493955 CA5AP35218 305 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 CSN1S1P47710 185 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 ERVS71-1P61550 626 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 GRK1Q15835 563 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 AKIRIN2Q53H80 203 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms