RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 BTCP35070 178 aa11.28□□□□□ -0.6
TRIM11-204ENST00000493030 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
TRIM11-204ENST00000493030 VMO1Q7Z5L0 202 aa11.28□□□□□ -0.6
TRIM11-204ENST00000493030 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
TRIM11-204ENST00000493030 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
TRIM11-204ENST00000493030 GTF3AQ92664 365 aaKnown RBP11.28□□□□□ -0.6
TRIM11-204ENST00000493030 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
TRIM11-204ENST00000493030 GTSCR1Q86UQ5 136 aa11.28□□□□□ -0.6
TRIM11-204ENST00000493030 RIF1Q5UIP0 2472 aaKnown RBP11.28□□□□□ -0.6
TRIM11-204ENST00000493030 EFNB3Q15768 340 aa11.28□□□□□ -0.6
TRIM11-204ENST00000493030 LINC00469Q8N7U9 141 aa11.27□□□□□ -0.6
TRIM11-204ENST00000493030 ZNF236Q9UL36 1845 aa11.27□□□□□ -0.6
TRIM11-204ENST00000493030 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
TRIM11-204ENST00000493030 EFNA4P52798 201 aa11.27□□□□□ -0.61
TRIM11-204ENST00000493030 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.61
TRIM11-204ENST00000493030 TRAV5A0A0B4J249 113 aa11.27□□□□□ -0.61
TRIM11-204ENST00000493030 TMEM200BQ69YZ2 307 aa11.27□□□□□ -0.61
TRIM11-204ENST00000493030 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
TRIM11-204ENST00000493030 CHD5Q8TDI0 1954 aa11.27□□□□□ -0.61
TRIM11-204ENST00000493030 SRRM5B3KS81 715 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 NAPSAO96009 420 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 TYMSP04818 313 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 EVI2AP22794 236 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 Q0VFX4 171 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
TRIM11-204ENST00000493030 SERF1AO75920 110 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 LY6G6FQ5SQ64 297 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 SIGLEC15Q6ZMC9 328 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 H0YIZ8 118 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 SAP30O75446 220 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 NABP1Q96AH0 204 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 ID3Q02535 119 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 SRSF6Q13247 344 aaKnown RBP11.26□□□□□ -0.61
TRIM11-204ENST00000493030 TNFRSF14Q92956 283 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 COL6A6A6NMZ7 2263 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 A0A087WWC5 75 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 GFI1Q99684 422 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 ZNF257Q9Y2Q1 563 aa11.26□□□□□ -0.61
TRIM11-204ENST00000493030 J3QRE1 110 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 IGHV1-8P0DP01 117 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 SRSF3P84103 164 aaKnown RBP11.25□□□□□ -0.61
TRIM11-204ENST00000493030 TRAV9-1A0A075B6T8 112 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 RBMY1BA6NDE4 496 aaKnown RBP11.25□□□□□ -0.61
TRIM11-204ENST00000493030 RBMY1EA6NEQ0 496 aaKnown RBP11.25□□□□□ -0.61
TRIM11-204ENST00000493030 PSPNO60542 156 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 RBMY1DP0C7P1 496 aaKnown RBP11.25□□□□□ -0.61
TRIM11-204ENST00000493030 RBMY1A1P0DJD3 496 aaKnown RBP11.25□□□□□ -0.61
TRIM11-204ENST00000493030 RBMY1CP0DJD4 496 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 RPL15P61313 204 aaKnown RBP11.25□□□□□ -0.61
TRIM11-204ENST00000493030 SPCS1Q9Y6A9 102 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 DOCK4Q8N1I0 1966 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 A0A1W2PRE2 83 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 NPIPB5A8MRT5 1133 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 A8MXK9 166 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 ADMP35318 185 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 ZNF415Q09FC8 603 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 ATRAIDQ6UW56 229 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 SEPSECSQ9HD40 501 aaKnown RBP11.25□□□□□ -0.61
TRIM11-204ENST00000493030 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 NEUROG3Q9Y4Z2 214 aa11.25□□□□□ -0.61
TRIM11-204ENST00000493030 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
TRIM11-204ENST00000493030 LINC00614P0C842 121 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 KIF26BQ2KJY2 2108 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 MED12Q93074 2177 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 IGKV1-27A0A075B6S5 117 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 TMEM178BH3BS89 294 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 IL18BPO95998 194 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 OCC1Q8TAD7 63 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 COQ2Q96H96 371 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 A0A0G2JNJ9 132 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 DSCR9P59020 149 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 CHCHD5Q9BSY4 110 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 PRDM13Q9H4Q3 707 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 NRN1Q9NPD7 142 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 Q9UFV3 132 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 CRPP02741 224 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 SRSF1Q07955 248 aaKnown RBP eCLIP11.24□□□□□ -0.619e-7■■■■□ 24.1
TRIM11-204ENST00000493030 HEPN1Q6WQI6 88 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 MBNL3Q9NUK0 354 aaKnown RBP11.24□□□□□ -0.61
TRIM11-204ENST00000493030 WDR83OSQ9Y284 106 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 CLDN16Q9Y5I7 305 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 SLC25A15Q9Y619 301 aa11.24□□□□□ -0.61
TRIM11-204ENST00000493030 TRGV11A0A075B6L2 103 aa11.23□□□□□ -0.61
TRIM11-204ENST00000493030 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
TRIM11-204ENST00000493030 IGHV1-3A0A0C4DH29 117 aa11.23□□□□□ -0.61
TRIM11-204ENST00000493030 PMS2P5A8MQ11 134 aa11.23□□□□□ -0.61
TRIM11-204ENST00000493030 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
TRIM11-204ENST00000493030 CD177Q8N6Q3 437 aa11.23□□□□□ -0.61
TRIM11-204ENST00000493030 H3BUX3 64 aa11.23□□□□□ -0.61
TRIM11-204ENST00000493030 CD28P10747 220 aa11.23□□□□□ -0.61
TRIM11-204ENST00000493030 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
TRIM11-204ENST00000493030 TRAV12-3A0A0B4J271 114 aa11.23□□□□□ -0.61
TRIM11-204ENST00000493030 A0A0U1RRA0 63 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms